RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SLC35F4A4IF30 521 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 CIB2O75838 187 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 HIST1H2ABP04908 130 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 RAP2AP10114 183 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 FUT1P19526 365 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 USF1P22415 310 aaPredicted RBP13.62□□□□□ -0.23
SKA2-209ENST00000583976 AHCYP23526 432 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 EFNA4P52798 201 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 TUBA1BP68363 451 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 TUBA4AP68366 448 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 DGCR6Q14129 220 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 TUBA1AQ71U36 451 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 HIST3H2AQ7L7L0 130 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 SLC46A3Q7Z3Q1 461 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 PIWIL3Q7Z3Z3 882 aaKnown RBP13.62□□□□□ -0.23
SKA2-209ENST00000583976 DEPDC4Q8N2C3 294 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 ZIC4Q8N9L1 334 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 OR5J2Q8NH18 312 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 HIST1H2ACQ93077 130 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 POP5Q969H6 163 aaKnown RBP13.62□□□□□ -0.23
SKA2-209ENST00000583976 BPIFA2Q96DR5 249 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 CHID1Q9BWS9 393 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 FKRPQ9H9S5 495 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 TCRBV3S1A0A5B6 114 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 C11orf98E9PRG8 122 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MS4A18H0YCH9 400 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 PLPP3O14495 311 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 SERPINI2O75830 405 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 OR7A10O76100 309 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 VAMP5O95183 116 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 OR6A2O95222 327 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 HPRP00739 348 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 ADORA3P0DMS8 318 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 ZNF43P17038 809 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MAKP20794 623 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MPGP29372 298 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MAGEA2P43356 314 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 GPR4P46093 362 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 SMIM11AP58511 58 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 GABPB1Q06547 395 aaPredicted RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 SEC23BQ15437 767 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 CARTPTQ16568 116 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MST1LQ2TV78 715 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MS4A18Q3C1V0 323 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 KLHL24Q6TFL4 600 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MBOAT2Q6ZWT7 520 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 CREB3L2Q70SY1 520 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 RNF113BQ8IZP6 322 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 TMEM45BQ96B21 275 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 RSRC1Q96IZ7 334 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 DHRS1Q96LJ7 313 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 OXGR1Q96P68 337 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 SF3B5Q9BWJ5 86 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 BEX2Q9BXY8 128 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 ANKRD19PQ9H560 264 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
SKA2-209ENST00000583976 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
SKA2-209ENST00000583976 NBEAL1Q6ZS30 2694 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 VWC2LB2RUY7 222 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 TNFRSF11BO00300 401 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 FZD7O75084 574 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 CSF3P09919 207 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 ASAH2BP0C7U1 165 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
SKA2-209ENST00000583976 HLA-DOBP13765 273 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 SELENOPP49908 381 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 PRKCDQ05655 676 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 PUDPQ08623 228 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 SWI5Q1ZZU3 235 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 CYB5R2Q6BCY4 276 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 AAED1Q7RTV5 226 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 MYPOPQ86VE0 399 aaPredicted RBP13.6□□□□□ -0.23
SKA2-209ENST00000583976 EPHX4Q8IUS5 362 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 CDK20Q8IZL9 346 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 SCAIQ8N9R8 606 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 OR4K5Q8NGD3 323 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 FAM46AQ96IP4 442 aaKnown RBP13.6□□□□□ -0.23
SKA2-209ENST00000583976 SHARPINQ9H0F6 387 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 TMEM160Q9NX00 188 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 TAS2R5Q9NYW4 299 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 B3GAT1Q9P2W7 334 aa13.6□□□□□ -0.23
SKA2-209ENST00000583976 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 RNF13O43567 381 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 LMX1BO60663 402 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 CST1P01037 141 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 IGF2P01344 180 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 APOBEC3AP31941 199 aaPredicted RBP13.59□□□□□ -0.23
SKA2-209ENST00000583976 CLDN17P56750 224 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 PRPS1P60891 318 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 POU3F1Q03052 451 aaPredicted RBP13.59□□□□□ -0.23
SKA2-209ENST00000583976 CCNIQ14094 377 aa13.59□□□□□ -0.23
SKA2-209ENST00000583976 LAPTM4AQ15012 233 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms