RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 IQCF5A8MTL0 148 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF670-ZNF695F2Z2N8 137 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 H0YIV9 168 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 hCG_2039718K7EN88 272 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TNFRSF11BO00300 401 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NDUFS4O43181 175 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SELENOFO60613 162 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 GPX5O75715 221 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PRAMEF12O95522 483 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF682O95780 498 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 MT-ATP6P00846 226 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PTHP01270 115 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 HLA-DQB1P01920 261 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 C8GP07360 202 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 DNAH10OSP0CZ25 163 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ADORA3P0DMS8 318 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CYP2A7P20853 494 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 IDSP22304 550 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CPN2P22792 545 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CD27P26842 260 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ERP29P30040 261 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 HLA-FP30511 346 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 RRM2P31350 389 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CSTF2P33240 577 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ATP5C1P36542 298 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TGFBR1P36897 503 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NSG1P42857 185 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CRYBB2P43320 205 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ASMTP46597 345 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 RORCP51449 518 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CRYBA2P53672 197 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CRISP1P54107 249 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 AP1S2P56377 157 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 GNG2P59768 71 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 AP1S1P61966 158 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PSPHP78330 225 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 GALK2Q01415 458 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SEMG2Q02383 582 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TAF10Q12962 218 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ILKQ13418 452 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NFATC2Q13469 925 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TNK1Q13470 666 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PTGES3Q15185 160 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 C10orf120Q5SQS8 335 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ATAD3CQ5T2N8 411 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ZCCHC12Q6PEW1 402 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 METAP1DQ6UB28 335 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TMPRSS11AQ6ZMR5 421 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF621Q6ZSS3 439 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 VTCN1Q7Z7D3 282 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRTM1Q86UE6 522 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TRIM69Q86WT6 500 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC30A8Q8IWU4 369 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TCTE3Q8IZS6 198 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 BATF2Q8N1L9 274 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 LINC00612Q8N6U2 182 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CLDN22Q8N7P3 220 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 B3GNT7Q8NFL0 401 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 OCC1Q8TAD7 63 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SELENOMQ8WWX9 145 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC7A6Q92536 515 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 FBXO32Q969P5 355 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NCLNQ969V3 563 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SLAMF9Q96A28 289 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ULK4Q96C45 1275 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 AP2M1Q96CW1 435 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 CXorf40BQ96DE9 158 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 Q96MT0 163 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 PANX1Q96RD7 426 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 LYSMD1Q96S90 227 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 HBEGFQ99075 208 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM246Q9BRR3 403 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 MED18Q9BUE0 208 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 FNDC11Q9BVV2 318 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ACPTQ9BZG2 426 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NDEL1Q9GZM8 345 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 C6orf62Q9GZU0 229 aaPredicted RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ASB8Q9H765 288 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 NIPAL2Q9H841 368 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SRD5A3Q9H8P0 318 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 MARCH7Q9H992 704 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TPT1P8Q9HAU6 139 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 HHATLQ9HCP6 504 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ACKR4Q9NPB9 350 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 IL26Q9NPH9 171 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ACOXLQ9NUZ1 547 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 MRPL39Q9NYK5 338 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 TAS2R9Q9NYW1 312 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 VPS29Q9UBQ0 182 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 LHX3Q9UBR4 397 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 SEC14L4Q9UDX3 406 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ATP6V1HQ9UI12 483 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 KLHL21Q9UJP4 597 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 STUB1Q9UNE7 303 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 LSM2Q9Y333 95 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 RBMX2Q9Y388 322 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms