RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 AQP2P41181 271 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 ZNF584Q8IVC4 421 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 POU5F2Q8N7G0 328 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 OR2T12Q8NG77 320 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 NEU4Q8WWR8 484 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 MRPL24Q96A35 216 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 RCN3Q96D15 328 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 SGTBQ96EQ0 304 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 ZNF347Q96SE7 839 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 MRPL37Q9BZE1 423 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 POLR2J2Q9GZM3 115 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 POLR2J3Q9H1A7 115 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 GMPR2Q9P2T1 348 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 SPEF1Q9Y4P9 236 aa18.35■□□□□ 0.53
CSNK1D-221ENST00000582844 A0A1W2PRG6 482 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 STAMBPO95630 424 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 IGHG1P01857 330 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 SERPINA5P05154 406 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 ERCC1P07992 297 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 GLRXP35754 106 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 CLRN1P58418 232 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 SELENOWP63302 87 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 MYBPC1Q00872 1141 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 HIST3H3Q16695 136 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 IQCCQ4KMZ1 466 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 MICU2Q8IYU8 434 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 SYT14Q8NB59 555 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 OR4K5Q8NGD3 323 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 MOSPD2Q8NHP6 518 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 MCHR2Q969V1 340 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 BPESC1Q9GZL8 116 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 CCDC134Q9H6E4 229 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 CMTM6Q9NX76 183 aa18.34■□□□□ 0.53
CSNK1D-221ENST00000582844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.34■□□□□ 0.534e-8■■■■□ 19.8
CSNK1D-221ENST00000582844 ELOVL7A1L3X0 281 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 IGF2P01344 180 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 APEHP13798 732 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 GZMKP49863 264 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 GALK2Q01415 458 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 LAPTM4AQ15012 233 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 FXNQ16595 210 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 GKAP1Q5VSY0 366 aaPredicted RBP18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 LRP11Q86VZ4 500 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 ARIH2OSQ8N7S6 290 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 ZNF540Q8NDQ6 660 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 ASB10Q8WXI3 467 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 SYT3Q9BQG1 590 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 MRPL13Q9BYD1 178 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 TPK1Q9H3S4 243 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 INIPQ9NRY2 104 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 CDC42EP3Q9UKI2 254 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 FBXL3Q9UKT7 428 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 MED31Q9Y3C7 131 aa18.33■□□□□ 0.52
CSNK1D-221ENST00000582844 SVEP1Q4LDE5 3571 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 MCIDASD6RGH6 385 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 SLC22A2O15244 555 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 TRMUO75648 421 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 FARS2O95363 451 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 IFNA2P01563 188 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 TSPAN19P0C672 248 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 THRBP10828 461 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 ACADSP16219 412 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 FUT4P22083 530 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 GIFP27352 417 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 EVX1P49640 407 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 PODNL1Q6PEZ8 512 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 ZNF786Q8N393 782 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 RP9Q8TA86 221 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 LIPHQ8WWY8 451 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 MSI2Q96DH6 328 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 SEPHS2Q99611 448 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 BEX2Q9BXY8 128 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 RNF121Q9H920 327 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 TMEM160Q9NX00 188 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 REV1Q9UBZ9 1251 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 FZR1Q9UM11 496 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 A4GNTQ9UNA3 340 aa18.32■□□□□ 0.52
CSNK1D-221ENST00000582844 LOC100289279A0A1B0GTE1 492 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 LYNX1G3V0Z9 82 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 SYNGR3O43761 229 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 PIP5K1CO60331 668 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 LMX1BO60663 402 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 ENTPD5O75356 428 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 LYNX1P0DP58 116 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 ZNF23P17027 643 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 YAP1P46937 504 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 ARMC4Q5T2S8 1044 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 CXXC5Q7LFL8 322 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 SLC16A14Q7RTX9 510 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 SLC15A3Q8IY34 581 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 NOXO1Q8NFA2 376 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 UBASH3BQ8TF42 649 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 MYEF2Q9P2K5 600 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 SNX13Q9Y5W8 968 aa18.31■□□□□ 0.52
CSNK1D-221ENST00000582844 LRP5LA4QPB2 252 aa18.3■□□□□ 0.52
CSNK1D-221ENST00000582844 FAM157CP0CG43 387 aa18.3■□□□□ 0.52
CSNK1D-221ENST00000582844 COX4I1P13073 169 aa18.3■□□□□ 0.52
CSNK1D-221ENST00000582844 CCL2P13500 99 aa18.3■□□□□ 0.52
CSNK1D-221ENST00000582844 TCN1P20061 433 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-221ENST00000582844 LSP1P33241 339 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms