RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 AQP2P41181 271 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 ZNF584Q8IVC4 421 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 POU5F2Q8N7G0 328 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 OR2T12Q8NG77 320 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 NEU4Q8WWR8 484 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 MRPL24Q96A35 216 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 RCN3Q96D15 328 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 SGTBQ96EQ0 304 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 ZNF347Q96SE7 839 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 MRPL37Q9BZE1 423 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 POLR2J2Q9GZM3 115 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 POLR2J3Q9H1A7 115 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 GMPR2Q9P2T1 348 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 SPEF1Q9Y4P9 236 aa18.35■□□□□ 0.53
CSNK1D-216ENST00000581108 A0A1W2PRG6 482 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 STAMBPO95630 424 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 IGHG1P01857 330 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 SERPINA5P05154 406 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 ERCC1P07992 297 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 GLRXP35754 106 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 CLRN1P58418 232 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 SELENOWP63302 87 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 MYBPC1Q00872 1141 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 HIST3H3Q16695 136 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 IQCCQ4KMZ1 466 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 MICU2Q8IYU8 434 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 SYT14Q8NB59 555 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 OR4K5Q8NGD3 323 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 MOSPD2Q8NHP6 518 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 MCHR2Q969V1 340 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 BPESC1Q9GZL8 116 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 CCDC134Q9H6E4 229 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 CMTM6Q9NX76 183 aa18.34■□□□□ 0.53
CSNK1D-216ENST00000581108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.34■□□□□ 0.534e-8■■■■□ 21.1
CSNK1D-216ENST00000581108 ELOVL7A1L3X0 281 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 IGF2P01344 180 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 APEHP13798 732 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 GZMKP49863 264 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 GALK2Q01415 458 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 LAPTM4AQ15012 233 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 FXNQ16595 210 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 GKAP1Q5VSY0 366 aaPredicted RBP18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 LRP11Q86VZ4 500 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 ARIH2OSQ8N7S6 290 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF540Q8NDQ6 660 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 ASB10Q8WXI3 467 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 SYT3Q9BQG1 590 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 MRPL13Q9BYD1 178 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 TPK1Q9H3S4 243 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 INIPQ9NRY2 104 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 CDC42EP3Q9UKI2 254 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 FBXL3Q9UKT7 428 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 MED31Q9Y3C7 131 aa18.33■□□□□ 0.52
CSNK1D-216ENST00000581108 SVEP1Q4LDE5 3571 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 MCIDASD6RGH6 385 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC22A2O15244 555 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 TRMUO75648 421 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 FARS2O95363 451 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 IFNA2P01563 188 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 TSPAN19P0C672 248 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 THRBP10828 461 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 ACADSP16219 412 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 FUT4P22083 530 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 GIFP27352 417 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 EVX1P49640 407 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 PODNL1Q6PEZ8 512 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF786Q8N393 782 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 RP9Q8TA86 221 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 LIPHQ8WWY8 451 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 MSI2Q96DH6 328 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 SEPHS2Q99611 448 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 BEX2Q9BXY8 128 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 RNF121Q9H920 327 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 TMEM160Q9NX00 188 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 REV1Q9UBZ9 1251 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 FZR1Q9UM11 496 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 A4GNTQ9UNA3 340 aa18.32■□□□□ 0.52
CSNK1D-216ENST00000581108 LOC100289279A0A1B0GTE1 492 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 LYNX1G3V0Z9 82 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 SYNGR3O43761 229 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 PIP5K1CO60331 668 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 LMX1BO60663 402 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 ENTPD5O75356 428 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 LYNX1P0DP58 116 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 ZNF23P17027 643 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 YAP1P46937 504 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 ARMC4Q5T2S8 1044 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 CXXC5Q7LFL8 322 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC16A14Q7RTX9 510 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 SLC15A3Q8IY34 581 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 NOXO1Q8NFA2 376 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 UBASH3BQ8TF42 649 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 MYEF2Q9P2K5 600 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 SNX13Q9Y5W8 968 aa18.31■□□□□ 0.52
CSNK1D-216ENST00000581108 LRP5LA4QPB2 252 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 FAM157CP0CG43 387 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 COX4I1P13073 169 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 CCL2P13500 99 aa18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 TCN1P20061 433 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-216ENST00000581108 LSP1P33241 339 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms