RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 C1orf185Q5T7R7 199 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 RTL6Q6ICC9 239 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 C3orf33Q6P1S2 294 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 NIPAL3Q6P499 406 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 TRILQ7L0X0 811 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 BIVMQ86UB2 503 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ANKRD13BQ86YJ7 626 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 KLHL36Q8N4N3 616 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 TMEM251Q8N6I4 163 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 OR2M3Q8NG83 312 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 OR4K13Q8NH42 304 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 C12orf43Q96C57 262 aaKnown RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 C1GALT1C1Q96EU7 318 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 COG8Q96MW5 612 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 MGLLQ99685 303 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 KATNB1Q9BVA0 655 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 FUNDC2Q9BWH2 189 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 POTEKPQ9BYX7 375 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 OR51V1Q9H2C8 321 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CXorf56Q9H5V9 222 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 HINT3Q9NQE9 182 aaKnown RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 INPP5EQ9NRR6 644 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 INIPQ9NRY2 104 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 TMEM129A0AVI4 362 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 OR14I1A6ND48 311 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 GJE1A6NN92 205 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 C17orf51A8MQB3 221 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 H3BMQ9 156 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 ETV2O00321 342 aaPredicted RBP9.07□□□□□ -0.96
SS18-207ENST00000577636 SLC22A1O15245 554 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 NPIPB7O75200 414 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 BGLAPP02818 100 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 INHBBP09529 407 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 TSPAN19P0C672 248 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
SS18-207ENST00000577636 AHCYP23526 432 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 DPP4P27487 766 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 GRPRP30550 384 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 SDHAP31040 664 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 PTGDSP41222 190 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 DNASE1L1P49184 302 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 RPL18Q07020 188 aaKnown RBP9.07□□□□□ -0.96
SS18-207ENST00000577636 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 PLPPR5Q32ZL2 321 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 SLC35D3Q5M8T2 416 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 ADCK1Q86TW2 530 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 FAM109AQ8N4B1 249 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 SCAIQ8N9R8 606 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 POMGNT2Q8NAT1 580 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 ATP6V1C2Q8NEY4 427 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 OR51G2Q8NGK0 314 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 MOSPD2Q8NHP6 518 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 TMEM41AQ96HV5 264 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 C18orf12Q96KH6 178 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 MOGAT1Q96PD6 335 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 MDFIQ99750 246 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 FAM173AQ9BQD7 235 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 ZDHHC11Q9H8X9 412 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 MRPL39Q9NYK5 338 aaKnown RBP9.07□□□□□ -0.96
SS18-207ENST00000577636 EXOGQ9Y2C4 368 aaKnown RBP9.07□□□□□ -0.96
SS18-207ENST00000577636 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
SS18-207ENST00000577636 ACANP16112 2415 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 NIPBLQ6KC79 2804 aaeCLIP9.06□□□□□ -0.96
SS18-207ENST00000577636 TRGV5A0A0B4J1U4 118 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 TEX13CA0A0J9YWL9 993 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 DAPL1A0PJW8 107 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
SS18-207ENST00000577636 CCRL2O00421 344 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 SNPHO15079 494 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 AIREO43918 545 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 WDR1O75083 606 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 TXNDC12O95881 172 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 PTHP01270 115 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 RAF1P04049 648 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 F13BP05160 661 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 CCL3P10147 92 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 BMP5P22003 454 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 SERPINB10P48595 397 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 CENPAP49450 140 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
SS18-207ENST00000577636 WNT4P56705 351 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 FHL1Q13642 323 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 TOMM20Q15388 145 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 OR7A5Q15622 319 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 GLYR1Q49A26 553 aaPredicted RBP9.06□□□□□ -0.96
SS18-207ENST00000577636 RAET1LQ5VY80 246 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 TIGD3Q6B0B8 471 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 LEG1Q6P5S2 330 aa9.06□□□□□ -0.96
SS18-207ENST00000577636 PAMR1Q6UXH9 720 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms