RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DUSP8Q13202 625 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 CAMK2DQ13557 499 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 NFATC4Q14934 902 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 HSD17B13Q7Z5P4 300 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF695Q8IW36 515 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TERB2Q8NHR7 220 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ASB13Q8WXK3 278 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 NICN1Q9BSH3 213 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 C20orf24Q9BUV8 137 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 NEU3Q9UQ49 428 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 H0YGG7 62 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SELENOPP49908 381 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TDGQ13569 410 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 AGERQ15109 404 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF542PQ5EBM4 170 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM184AQ6ZMB5 413 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 PPP1R1CQ8WVI7 109 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ARSGQ96EG1 525 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 RAB22AQ9UL26 194 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 BCL2L11O43521 198 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PMP2P02689 132 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PTHLHP12272 177 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 DAP3P51398 398 aaKnown RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 FAM26DQ5JW98 314 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 BEND4Q6ZU67 534 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 TRMT61AQ96FX7 289 aaKnown RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PPP1R3EQ9H7J1 279 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 UFSP2Q9NUQ7 469 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 MSRAQ9UJ68 235 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SERTAD3Q9UJW9 196 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PPP1R2P9O14990 202 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 ELOCQ15369 112 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 RNF212Q495C1 297 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 CXorf58Q96LI9 332 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPR137Q96N19 417 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM59Q9BXS4 323 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC6A17Q9H1V8 727 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SSC5DA1L4H1 1573 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 EFCAB7A8K855 629 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF705FA8MVS1 300 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 FFAR1O14842 300 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 CBX7O95931 251 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF705DP0CH99 300 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF705BP0CI00 300 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 NPY4RP50391 375 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 C21orf58P58505 322 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM71Q6P5X7 295 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 SCMH1Q96GD3 660 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 CMTM3Q96MX0 182 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PPP4R1LQ9P1A2 415 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 PURGQ9UJV8 347 aaKnown RBP12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
PCDHGB3-201ENST00000576222 TRAV20A0A0B4J274 112 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF264O43296 627 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ABLIM3O94929 683 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 TACR3P29371 465 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 SERPINF1P36955 418 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ACY1Q03154 408 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR56B1Q8NGI3 324 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 HAS2Q92819 552 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 LRFN5Q96NI6 719 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 SAGE1Q9NXZ1 904 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 A0A0J9YY10 115 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 TCRBV16S1A1N1A0A5B0 115 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM235A6NFC5 223 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF44P15621 663 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF84P51523 738 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR7A5Q15622 319 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 NSDHLQ15738 373 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR9A4Q8NGU2 314 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 CNRIP1Q96F85 164 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 CX3CR1P49238 355 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 PMPCAQ10713 525 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 METRNLQ641Q3 311 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 UEVLDQ8IX04 471 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 PCYT1BQ9Y5K3 369 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 KIAA1217Q5T5P2 1943 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 IGLV3-16A0A075B6K0 115 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 XRCC3O43542 346 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 HPXP02790 462 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 GABRR1P24046 479 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms