RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 FABP1P07148 127 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 CALCRP30988 508 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 CDK3Q00526 305 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 IL10RAQ13651 578 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 TMPRSS11FQ6ZWK6 438 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF227Q86WZ6 799 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 KREMEN2Q8NCW0 462 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 OR5T2Q8NGG2 359 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 NR4A3Q92570 626 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 RSRP1Q9BUV0 290 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 EPHX3Q9H6B9 360 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 RXFP3Q9NSD7 469 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 MBD2Q9UBB5 411 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF629Q9UEG4 869 aaPredicted RBP13.23□□□□□ -0.29
SCARF1-209ENST00000576012 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 TTLL8A6PVC2 850 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 MPTX1A8MV57 137 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 ACAA1P09110 424 aaPredicted RBP13.23□□□□□ -0.29
SCARF1-209ENST00000576012 CST5P28325 142 aaPredicted RBP13.23□□□□□ -0.29
SCARF1-209ENST00000576012 FAM53BQ14153 422 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 SLC22A6Q4U2R8 563 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 NKAIN2Q5VXU1 208 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 NRSN1Q8IZ57 195 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 C10orf90Q96M02 699 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 WDR87Q6ZQQ6 2873 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 CTAG2O75638 210 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 NDUFB2O95178 105 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 PGAM2P15259 253 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 PPT1P50897 306 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 PLAURQ03405 335 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 DUSP8Q13202 625 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 DHRS2Q13268 280 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 C2orf76Q3KRA6 126 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 Q499Y3 187 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 MOB3CQ70IA8 216 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 INO80EQ8NBZ0 244 aaPredicted RBP13.23□□□□□ -0.29
SCARF1-209ENST00000576012 ROBO4Q8WZ75 1007 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 FAM46BQ96A09 425 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 PCBD2Q9H0N5 130 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 GPR34Q9UPC5 381 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 SLC22A13Q9Y226 551 aa13.23□□□□□ -0.29
SCARF1-209ENST00000576012 S100A6P06703 90 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 DBIP07108 87 aaKnown RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 ITGA5P08648 1049 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 VIPR2P41587 438 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 DIO1P49895 249 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 PRKXP51817 358 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 ARHGAP11BQ3KRB8 267 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 GABRG1Q8N1C3 465 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 OR6N1Q8NGY5 312 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 GAS2L1Q99501 681 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 WDR76Q9H967 626 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 PRNPP04156 253 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 CT62P0C5K7 136 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 CDKN2AP42771 156 aaKnown RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 TRA2BP62995 288 aaKnown RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 POU4F2Q12837 409 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 SMAD2Q15796 467 aaKnown RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 KIRREL2Q6UWL6 708 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 SLC6A7Q99884 636 aa13.22□□□□□ -0.29
SCARF1-209ENST00000576012 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 MRPS2Q9Y399 296 aaKnown RBP13.22□□□□□ -0.29
SCARF1-209ENST00000576012 RAB19A4D1S5 217 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM235A6NFC5 223 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 XRCC3O43542 346 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ICOSLGO75144 302 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 LYPD3O95274 346 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
SCARF1-209ENST00000576012 RUNX2Q13950 521 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 OR52W1Q6IF63 320 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 TMEM52Q8NDY8 209 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ELP5Q8TE02 316 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ZBTB8AQ96BR9 441 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 CMBLQ96DG6 245 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 INSL6Q9Y581 213 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 VEGFDO43915 354 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 PLGP00747 810 aaPredicted RBP13.21□□□□□ -0.29
SCARF1-209ENST00000576012 CSF1P09603 554 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 DAOP14920 347 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 RFC3P40938 356 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ID4P47928 161 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 CDNFQ49AH0 187 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 AVPI1Q5T686 147 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 C11orf87Q6NUJ2 197 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 SLC35F3Q8IY50 421 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 RNF113BQ8IZP6 322 aaKnown RBP13.21□□□□□ -0.29
SCARF1-209ENST00000576012 SYS1Q8N2H4 156 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ACBD4Q8NC06 268 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms