RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
LITAF-217ENST00000575426 MCHR2Q969V1 340 aa13.31□□□□□ -0.28
LITAF-217ENST00000575426 ZNF570Q96NI8 536 aa13.31□□□□□ -0.28
LITAF-217ENST00000575426 GPA33Q99795 319 aa13.31□□□□□ -0.28
LITAF-217ENST00000575426 MRPL13Q9BYD1 178 aaKnown RBP13.31□□□□□ -0.28
LITAF-217ENST00000575426 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
LITAF-217ENST00000575426 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
LITAF-217ENST00000575426 RNF115Q9Y4L5 304 aa13.31□□□□□ -0.28
LITAF-217ENST00000575426 TACC2O95359 2948 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 DPRXA6NFQ7 191 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 SEC14L2O76054 403 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 FARS2O95363 451 aaKnown RBP13.3□□□□□ -0.28
LITAF-217ENST00000575426 GASTP01350 101 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 OR8G3PP0DMU2 310 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 CD79AP11912 226 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 GSTM3P21266 225 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 BSPH1Q075Z2 132 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 HIST3H3Q16695 136 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 RFX4Q33E94 735 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 RPL13AP3Q6NVV1 102 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 ZNF704Q6ZNC4 412 aaPredicted RBP13.3□□□□□ -0.28
LITAF-217ENST00000575426 AQP11Q8NBQ7 271 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
LITAF-217ENST00000575426 OR52L1Q8NGH7 329 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 ZNF519Q8TB69 540 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 Q96M85 177 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 GPX7Q96SL4 187 aaPredicted RBP13.3□□□□□ -0.28
LITAF-217ENST00000575426 KCNK17Q96T54 332 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 UBTD1Q9HAC8 227 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 NRIP3Q9NQ35 241 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 VNN3Q9NY84 501 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 ADAM18Q9Y3Q7 739 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 IER3IP1Q9Y5U9 82 aa13.3□□□□□ -0.28
LITAF-217ENST00000575426 HRNRQ86YZ3 2850 aaPredicted RBP13.3□□□□□ -0.28
LITAF-217ENST00000575426 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 LRBAP50851 2863 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 ABCD4O14678 606 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 AHCYL1O43865 530 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 DEAF1O75398 565 aaPredicted RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 B4GALT1P15291 398 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 ZNF26P17031 533 aaPredicted RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 CD40P25942 277 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 LOXP28300 417 aaPredicted RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 NOS3P29474 1203 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 SDHAP31040 664 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 TUBA1BP68363 451 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 TUBA4AP68366 448 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 THSD4Q6ZMP0 1018 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 TUBA1AQ71U36 451 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 ZNF627Q7L945 461 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 SLC22A24Q8N4F4 322 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 OR10G2Q8NGC3 310 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 RADILQ96JH8 1075 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 SAMD8Q96LT4 415 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 ERMAPQ96PL5 475 aaPredicted RBP13.29□□□□□ -0.28
LITAF-217ENST00000575426 IFT27Q9BW83 186 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 NELFAQ9H3P2 528 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 PLEKHF2Q9H8W4 249 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 SMURF2Q9HAU4 748 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
LITAF-217ENST00000575426 CADP27708 2225 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 TEX13CA0A0J9YWL9 993 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 SOCS2O14508 198 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 IMPA2O14732 288 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 MGRN1O60291 552 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 TIPRLO75663 272 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 PLAUP00749 431 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 APEHP13798 732 aaKnown RBP13.28□□□□□ -0.28
LITAF-217ENST00000575426 CBR1P16152 277 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 DNASE1P24855 282 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 ZNF133P52736 654 aaPredicted RBP13.28□□□□□ -0.28
LITAF-217ENST00000575426 KEAP1Q14145 624 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 C10orf128Q5T292 105 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 ZNF770Q6IQ21 691 aaPredicted RBP13.28□□□□□ -0.28
LITAF-217ENST00000575426 SLC25A47Q6Q0C1 308 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 SEZ6L2Q6UXD5 910 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 FAM122BQ7Z309 247 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 C10orf67Q8IYJ2 551 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 NSMAFQ92636 917 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 NRGNQ92686 78 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 RASD2Q96D21 266 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 SLC38A2Q96QD8 506 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
LITAF-217ENST00000575426 TMEM204Q9BSN7 226 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms