RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 FAM180AQ6UWF9 173 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 SHFQ7M4L6 423 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 NOXO1Q8NFA2 376 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 OR6K6Q8NGW6 343 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 FAR1Q8WVX9 515 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RORBQ92753 470 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 INTS12Q96CB8 462 aaKnown RBP12.17□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF385AQ96PM9 386 aaKnown RBP12.17□□□□□ -0.46
CCDC40-209ENST00000573474 OR2M2Q96R28 347 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 CNN2Q99439 309 aaKnown RBP12.17□□□□□ -0.46
CCDC40-209ENST00000573474 TUBA1CQ9BQE3 449 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 JAM3Q9BX67 310 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RACGAP1Q9H0H5 632 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RERGLQ9H628 205 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RNF122Q9H9V4 155 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 ADGRL4Q9HBW9 690 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 INPP5EQ9NRR6 644 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 KLHL9Q9P2J3 617 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 RCE1Q9Y256 329 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 ERGIC3Q9Y282 383 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF175Q9Y473 711 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 FLVCR1Q9Y5Y0 555 aa12.17□□□□□ -0.46
CCDC40-209ENST00000573474 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 A0A1B0GTH9 108 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 DPPA5A6NC42 116 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF99A8MXY4 864 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF432O94892 652 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 MRPL3P09001 348 aaKnown RBP12.16□□□□□ -0.46
CCDC40-209ENST00000573474 CTLA4P16410 223 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
CCDC40-209ENST00000573474 HIST3H3Q16695 136 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 UBE2UQ5VVX9 321 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 ACBD7Q8N6N7 88 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF511Q8NB15 262 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 FNDC9Q8TBE3 224 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 MUL1Q969V5 352 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 TMEM45BQ96B21 275 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 NMD3Q96D46 503 aaKnown RBP12.16□□□□□ -0.46
CCDC40-209ENST00000573474 GPR137Q96N19 417 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 LUZP4Q9P127 313 aa12.16□□□□□ -0.46
CCDC40-209ENST00000573474 A6NHS1 94 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF724A8MTY0 619 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 C12orf71A8MTZ7 269 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 SLC43A1O75387 559 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 AQP8O94778 261 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 OR2T7P0C7T2 308 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 FCGR2AP12318 317 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 CSNK1A1P48729 337 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ETV1P50549 477 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ACTC1P68032 377 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ACTA1P68133 377 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 FMODQ06828 376 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ETFDHQ16134 617 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF324BQ6AW86 544 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-209ENST00000573474 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 AAED1Q7RTV5 226 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 SLC16A9Q7RTY1 509 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 SLC35F2Q8IXU6 374 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 NANOGP1Q8N7R0 232 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 TEX19Q8NA77 164 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 Q8NA96 180 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 OR10H4Q8NGA5 316 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 OR6N1Q8NGY5 312 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 OR2T27Q8NH04 317 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-209ENST00000573474 MND1Q9BWT6 205 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 MARCH7Q9H992 704 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 PARPBPQ9NWS1 579 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 TAS2R16Q9NYV7 291 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 GLTPQ9NZD2 209 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 CLEC2DQ9UHP7 191 aa12.15□□□□□ -0.46
CCDC40-209ENST00000573474 ING1Q9UK53 422 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-209ENST00000573474 COA3Q9Y2R0 106 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-209ENST00000573474 MGAQ8IWI9 3026 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LAMA5O15230 3695 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF407Q9C0G0 2248 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 DAPL1A0PJW8 107 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 MYL12BO14950 172 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 SELENOFO60613 162 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 INMTO95050 263 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 PTHP01270 115 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 QDPRP09417 244 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LIMS3P0CW19 117 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LIMS4P0CW20 117 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 TTKP33981 857 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 PTGS2P35354 604 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 NAA10P41227 235 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms