RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SLCO5A1Q9H2Y9 848 aa11.69□□□□□ -0.54
CCDC40-205ENST00000571028 ARMC1Q9NVT9 282 aa11.69□□□□□ -0.54
CCDC40-205ENST00000571028 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
CCDC40-205ENST00000571028 HIF3AQ9Y2N7 669 aa11.69□□□□□ -0.54
CCDC40-205ENST00000571028 LOC102725191A0A1B0GVB3 256 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 CIB4A0PJX0 185 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 LYZL6O75951 148 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 IL32P24001 234 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 CCKARP32238 428 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 MYBPC1Q00872 1141 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 TAF11Q15544 211 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 ICA1LQ8NDH6 482 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 FANK1Q8TC84 345 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-205ENST00000571028 NDEL1Q9GZM8 345 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 FANCFQ9NPI8 374 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 ASB6Q9NWX5 421 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF346Q9UL40 294 aaKnown RBP11.68□□□□□ -0.54
CCDC40-205ENST00000571028 LAMP3Q9UQV4 416 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
CCDC40-205ENST00000571028 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-205ENST00000571028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-205ENST00000571028 SAC3D1A6NKF1 404 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 HS3ST1O14792 307 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 KLF4O43474 513 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 PTP4A3O75365 173 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 RAD51DO75771 328 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 NDUFB2O95178 105 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 SOX14O95416 240 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 BAG2O95816 211 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF23P17027 643 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF26P17031 533 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-205ENST00000571028 IGHV1-2P23083 117 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 FPR3P25089 353 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ACVR1BP36896 505 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 GSSP48637 474 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 CLRN1P58418 232 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 PRPS1P60891 318 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
CCDC40-205ENST00000571028 TSPAN31Q12999 210 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 FHL1Q13642 323 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 STK11Q15831 433 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 KRTAP24-1Q3LI83 254 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 SMARCD3Q6STE5 483 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 STAC2Q6ZMT1 411 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 Q6ZT83 130 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 GABRG1Q8N1C3 465 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 LINC00471Q8N535 108 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF611Q8N823 705 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 POMGNT2Q8NAT1 580 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 STMN2Q93045 179 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 KISS1RQ969F8 398 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-205ENST00000571028 DUS3LQ96G46 650 aaKnown RBP11.67□□□□□ -0.54
CCDC40-205ENST00000571028 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 FEVQ99581 238 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 NIPSNAP1Q9BPW8 284 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 BEX2Q9BXY8 128 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 OR52D1Q9H346 318 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 EGLN3Q9H6Z9 239 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 NTN4Q9HB63 628 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 KIF17Q9P2E2 1029 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 MGAT4BQ9UQ53 548 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 RCE1Q9Y256 329 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 ADAM18Q9Y3Q7 739 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 IER3IP1Q9Y5U9 82 aa11.67□□□□□ -0.54
CCDC40-205ENST00000571028 A0A1W2PR80 420 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 TRMUO75648 421 aaKnown RBP11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF432O94892 652 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 PPP1R3DO95685 299 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-205ENST00000571028 FCGR1AP12314 374 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 POU1F1P28069 291 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 CSNK1A1P48729 337 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 DAP3P51398 398 aaKnown RBP11.66□□□□□ -0.54
CCDC40-205ENST00000571028 RUNX1T1Q06455 604 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ITGADQ13349 1161 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 CLEC12AQ5QGZ9 265 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 SFRP5Q5T4F7 317 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF770Q6IQ21 691 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZFP1Q6P2D0 407 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 NHLRC1Q6VVB1 395 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 BHLHA15Q7RTS1 189 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-205ENST00000571028 C20orf196Q8IYI0 205 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 TMEM123Q8N131 208 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ATG16L2Q8NAA4 619 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 OR5K1Q8NHB7 308 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms