RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF566Q969W8 418 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 C7orf26Q96N11 449 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 LRRC37BQ96QE4 947 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 ARHGDIGQ99819 225 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 CPPED1Q9BRF8 314 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 TMEM43Q9BTV4 400 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 CDH20Q9HBT6 801 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 TMEM38BQ9NVV0 291 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 TAS2R5Q9NYW4 299 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC7A7Q9UM01 511 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 ANGPT4Q9Y264 503 aa7.37□□□□□ -1.23
CTDNEP1-203ENST00000570385 LOC105371242A0A075B767 164 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 BLOC1S5-TXNDC5H3BN57 136 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 DHHO43323 396 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 CHP2O43745 196 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 RP2O75695 350 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 LYPD3O95274 346 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 MT-ATP6P00846 226 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 HIST1H2ABP04908 130 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 QDPRP09417 244 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 CCNOP22674 350 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 MRPL19P49406 292 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 PCBP3P57721 371 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 LMO4P61968 165 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 RPS23P62266 143 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 RBBP4Q09028 425 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 HNRNPA0Q13151 305 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 RUNDC3AQ59EK9 446 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 TMEM154Q6P9G4 183 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF613Q6PF04 617 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 TTC33Q6PID6 262 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 HIST3H2AQ7L7L0 130 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 PIWIL3Q7Z3Z3 882 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 MEX3DQ86XN8 651 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 C11orf65Q8NCR3 313 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 BHLHE22Q8NFJ8 381 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 OR6X1Q8NH79 312 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 ADAMTS16Q8TE57 1224 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 HIST1H2ACQ93077 130 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF347Q96SE7 839 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 CCDC28BQ9BUN5 200 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 PLA2G12AQ9BZM1 189 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 RACGAP1Q9H0H5 632 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 NANSQ9NR45 359 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC7A8Q9UHI5 535 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 GRIP1Q9Y3R0 1128 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 CACNG2Q9Y698 323 aa7.36□□□□□ -1.23
CTDNEP1-203ENST00000570385 C17orf100A8MU93 164 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TPD52L2O43399 206 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SHOX2O60902 331 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 MPZL1O95297 269 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 FARS2O95363 451 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TGDSO95455 350 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 BCL10O95999 233 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 AVPP01185 164 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 F13BP05160 661 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 PGA4P0DJD7 388 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 PGA3P0DJD8 388 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 ADRA2CP18825 462 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TNFRSF1BP20333 461 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 PCMT1P22061 227 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 CFPP27918 469 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 CDAP32320 146 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 RBMXP38159 391 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TMEM33P57088 247 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 KLF3P57682 345 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 CLRN1P58418 232 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 ACTG1P63261 375 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TSTQ16762 297 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 BEND6Q5SZJ8 279 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SPATA46Q5T0L3 261 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 REP15Q6BDI9 236 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TMEM53Q6P2H8 277 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 UGT2A3Q6UWM9 527 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 USP51Q70EK9 711 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC16A14Q7RTX9 510 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 NANOGNBQ7Z5D8 188 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 DHDDSQ86SQ9 333 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 RETREG3Q86VR2 466 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SEMA6DQ8NFY4 1073 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 OR51F2Q8NH61 342 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 OR10A6Q8NH74 314 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SYNPRQ8TBG9 265 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC26A7Q8TE54 656 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SNX33Q8WV41 574 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 MCHR2Q969V1 340 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 TAMM41Q96BW9 452 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 SLC25A44Q96H78 314 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 CGREF1Q99674 301 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF416Q9BWM5 594 aa7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 DENND2DQ9H6A0 471 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 MEPEQ9NQ76 525 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 HINT3Q9NQE9 182 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 LEF1Q9UJU2 399 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 ZNF346Q9UL40 294 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-203ENST00000570385 CORO2BQ9UQ03 480 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms