RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SMPD3Q9NY59 655 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 IKZF3Q9UKT9 509 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 ZNF490Q9ULM2 529 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 SNX6Q9UNH7 406 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 POLR3HQ9Y535 204 aaPredicted RBP3.11□□□□□ -1.91
UBR1-211ENST00000569971 ORC6Q9Y5N6 252 aa3.11□□□□□ -1.91
UBR1-211ENST00000569971 GBF1Q92538 1859 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 PLXNA4Q9HCM2 1894 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 A0A096LPI6 279 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 IQCMA0A1B0GVH7 501 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 A8MX80 341 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 EVPLLA8MZ36 301 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 LOC730098B7Z3J9 87 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 G3V2T6 193 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 K7ERQ8 282 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GNGT2O14610 69 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 EI24O14681 340 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 TAPBPO15533 448 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 TSPAN2O60636 221 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 MYO1DO94832 1006 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 DUS4LO95620 317 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 CALCBP10092 127 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CCL5P13501 91 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ETS2P15036 469 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 NCK1P16333 377 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZNF30P17039 623 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GGT1P19440 569 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 UGT1A4P22310 534 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 PTPN6P29350 595 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CD70P32970 193 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 UGT1A3P35503 534 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 UGT1A5P35504 534 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 SOX6P35712 828 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZFP36L2P47974 494 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 ALDH3B2P48448 385 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 SPINT3P49223 89 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CDK9P50750 372 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 ARHGDIAP52565 204 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ARFIP1P53367 373 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 AP1S2P56377 157 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 NUP107P57740 925 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 MTPNP58546 118 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ERVK-16P61578 105 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 RPS14P62263 151 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 GK3PQ14409 553 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CDKN3Q16667 212 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 HKDC1Q2TB90 917 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 C18orf21Q32NC0 220 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 LRIT3Q3SXY7 679 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 SLC36A3Q495N2 470 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZBED5Q49AG3 693 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GGTA1PQ4G0N0 100 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CARD16Q5EG05 197 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 FBXO48Q5FWF7 155 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 PAGE3Q5JUK9 113 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 OTUD3Q5T2D3 398 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 DDI2Q5TDH0 399 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GFI1BQ5VTD9 330 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 TTC23Q5W5X9 447 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 LRRC66Q68CR7 880 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 C22orf39Q6P5X5 142 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 DPY19L2P2Q6ZN68 376 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 FRRS1Q6ZNA5 592 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 LPCAT2Q7L5N7 544 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 TMEM150AQ86TG1 271 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 RALGPS2Q86X27 583 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 GRAMD2AQ8IUY3 354 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ERI1Q8IV48 349 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 BBS7Q8IWZ6 715 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 MICU2Q8IYU8 434 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CMTM8Q8IZV2 173 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GCNT2Q8N0V5 402 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CLEC4FQ8N1N0 589 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 SVOPLQ8N434 492 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 LIX1Q8N485 282 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CLDN19Q8N6F1 224 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GPR26Q8NDV2 337 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CHDHQ8NE62 594 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZNF555Q8NEP9 628 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 NUP37Q8NFH4 326 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 OR52E4Q8NGH9 312 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 OR6F1Q8NGZ6 308 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 WDR36Q8NI36 951 aaKnown RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 C11orf45Q8TAV5 145 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZNF519Q8TB69 540 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 WFDC5Q8TCV5 224 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 MAGEE2Q8TD90 523 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 MCOLN3Q8TDD5 553 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 GIPC3Q8TF64 312 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ASZ1Q8WWH4 475 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 NR4A3Q92570 626 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 ZNF689Q96CS4 500 aaPredicted RBP3.1□□□□□ -1.91
UBR1-211ENST00000569971 ECHDC3Q96DC8 303 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 NRBF2Q96F24 287 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 CMTM7Q96FZ5 175 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 TEX37Q96LM6 180 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 RDH12Q96NR8 316 aa3.1□□□□□ -1.91
UBR1-211ENST00000569971 OR52E6Q96RD3 313 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms