RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 RAB1AP62820 205 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 PRKCDQ05655 676 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 NRN1LQ496H8 165 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 ARMC4Q5T2S8 1044 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 VHLLQ6RSH7 139 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 PIGWQ7Z7B1 504 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 HTRA1Q92743 480 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 MCHR2Q969V1 340 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 FAM162AQ96A26 154 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 PLK3Q9H4B4 646 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 STX18Q9P2W9 335 aaKnown RBP17.57■□□□□ 0.4
CLK3-225ENST00000569063 RPS6KA6Q9UK32 745 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 FBXL3Q9UKT7 428 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 VSTM5A8MXK1 200 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 TRMUO75648 421 aaKnown RBP17.56■□□□□ 0.4
CLK3-225ENST00000569063 ZNF35P13682 527 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 MAKP20794 623 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 NR4A1P22736 598 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 THBS4P35443 961 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 GIPRP48546 466 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 TAF11Q15544 211 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 CLEC2AQ6UVW9 174 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 TSEN54Q7Z6J9 526 aaKnown RBP17.56■□□□□ 0.4
CLK3-225ENST00000569063 NRMQ8IXM6 262 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 MAPK1IP1LQ8NDC0 245 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 NOXO1Q8NFA2 376 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 ACOT11Q8WXI4 607 aaPredicted RBP17.56■□□□□ 0.4
CLK3-225ENST00000569063 MS4A3Q96HJ5 214 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 ZNF347Q96SE7 839 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 TXNIPQ9H3M7 391 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 ADA2Q9NZK5 511 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 FBXO9Q9UK97 447 aaPredicted RBP17.56■□□□□ 0.4
CLK3-225ENST00000569063 ARL2BPQ9Y2Y0 163 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 ENPP4Q9Y6X5 453 aa17.56■□□□□ 0.4
CLK3-225ENST00000569063 IGHV4-30-2A0A087WSY4 118 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
CLK3-225ENST00000569063 RAB36O95755 333 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 NPR2P20594 1047 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 KRTAP1-1Q07627 177 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 DAG1Q14118 895 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 ANKDD1AQ495B1 522 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 ALG10Q5BKT4 473 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 GLYATQ6IB77 296 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 DPPA2Q7Z7J5 298 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 CYP4Z1Q86W10 505 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 ZNF525Q8N782 197 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 SYT14Q8NB59 555 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 FGFBP3Q8TAT2 258 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 ANKRD19PQ9H560 264 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 DCAF13Q9NV06 445 aaKnown RBP17.55■□□□□ 0.4
CLK3-225ENST00000569063 EGFL7Q9UHF1 273 aa17.55■□□□□ 0.4
CLK3-225ENST00000569063 A0A087WUU8 490 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 MGRN1O60291 552 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 IGHMP01871 453 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 SERPINA5P05154 406 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 CSF3P09919 207 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 PATE4P0C8F1 98 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 SAGP10523 405 aaPredicted RBP17.54■□□□□ 0.4
CLK3-225ENST00000569063 ZNF84P51523 738 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 FHL1Q13642 323 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 FXNQ16595 210 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 C10orf128Q5T292 105 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 ZNF730Q6ZMV8 503 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 MBOAT2Q6ZWT7 520 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 ZNF584Q8IVC4 421 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 CDK20Q8IZL9 346 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 LRRC75AQ8NAA5 344 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 RBM15BQ8NDT2 890 aaKnown RBP17.54■□□□□ 0.4
CLK3-225ENST00000569063 OR4K5Q8NGD3 323 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 HDAC2Q92769 488 aaKnown RBP17.54■□□□□ 0.4
CLK3-225ENST00000569063 NMD3Q96D46 503 aaKnown RBP17.54■□□□□ 0.4
CLK3-225ENST00000569063 SORCS2Q96PQ0 1159 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 LRRC37BQ96QE4 947 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 DOK1Q99704 481 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 SH3GL3Q99963 347 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 GORASP2Q9H8Y8 452 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 NMNAT1Q9HAN9 279 aaPredicted RBP17.54■□□□□ 0.4
CLK3-225ENST00000569063 SMURF2Q9HAU4 748 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 SPEF1Q9Y4P9 236 aa17.54■□□□□ 0.4
CLK3-225ENST00000569063 A0A096LNT2 108 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 TMEM129A0AVI4 362 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 SLC9A3P48764 834 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 PPOXP50336 477 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 MYBPC1Q00872 1141 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 SNTB2Q13425 540 aaKnown RBP17.53■□□□□ 0.4
CLK3-225ENST00000569063 RAB39AQ14964 217 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 KRT80Q6KB66 452 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 TBPL2Q6SJ96 375 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 TMPRSS11FQ6ZWK6 438 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 OAFQ86UD1 273 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 RNF148Q8N7C7 305 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 C10orf105Q8TEF2 133 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 FAM168AQ92567 244 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 KCNK17Q96T54 332 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 NDUFAF4Q9P032 175 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 SAMD4AQ9UPU9 718 aaKnown RBP17.53■□□□□ 0.4
CLK3-225ENST00000569063 FKBP7Q9Y680 259 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 ZANQ9Y493 2812 aa17.53■□□□□ 0.4
CLK3-225ENST00000569063 ARFGEF3Q5TH69 2177 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 A0A1W2PRQ8 180 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms