RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 BAIAP2Q9UQB8 552 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 POFUT2Q9Y2G5 429 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 ADAM18Q9Y3Q7 739 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 CENPEQ02224 2701 aa10.7□□□□□ -0.7
SF3B3-208ENST00000567250 G3V2T6 193 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 H3BN98 237 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 ARPC3O15145 178 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 IDH3BO43837 385 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 PPP1R3DO95685 299 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TXNDC12O95881 172 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 CRYGSP22914 178 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 UBE2NP61088 152 aaKnown RBP10.69□□□□□ -0.7
SF3B3-208ENST00000567250 LGALS3BPQ08380 585 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TSC22D1Q15714 1073 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TAB1Q15750 504 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 HIST3H3Q16695 136 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TBRG1Q3YBR2 411 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 NRN1LQ496H8 165 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 MESTQ5EB52 335 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 BEX5Q5H9J7 111 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 THEM4Q5T1C6 240 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-208ENST00000567250 ANKRD34AQ69YU3 496 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 DNM1P34Q6PK57 102 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 LINGO2Q7L985 606 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TMEM179BQ7Z7N9 219 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 WFDC8Q8IUA0 241 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 CCDC36Q8IYA8 594 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 OR2T33Q8NG76 320 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 LRTOMTQ8WZ04 291 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 ZC3HAV1LQ96H79 300 aaKnown RBP10.69□□□□□ -0.7
SF3B3-208ENST00000567250 SAMD8Q96LT4 415 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 Q96M85 177 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 MUS81Q96NY9 551 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 WFIKKN1Q96NZ8 548 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 ERMAPQ96PL5 475 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-208ENST00000567250 RBP7Q96R05 134 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 SNX18Q96RF0 628 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 NIPSNAP1Q9BPW8 284 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 OSBPL10Q9BXB5 764 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 TEX12Q9BXU0 123 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
SF3B3-208ENST00000567250 GABARAPL1Q9H0R8 117 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 EGLN3Q9H6Z9 239 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 NTN4Q9HB63 628 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 SLC17A5Q9NRA2 495 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 IL20Q9NYY1 176 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 IER3IP1Q9Y5U9 82 aa10.69□□□□□ -0.7
SF3B3-208ENST00000567250 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ARPC4-TTLL3A0A0A6YYG9 625 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 A6NNC1 897 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 SOCS2O14508 198 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ARHGEF9O43307 516 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 DHHO43323 396 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 MGRN1O60291 552 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 FARS2O95363 451 aaKnown RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 SOX14O95416 240 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 RENP00797 406 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 QDPRP09417 244 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF26P17031 533 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 GUCA1AP43080 201 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF133P52736 654 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 NR1H2P55055 460 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 FOXG1P55316 489 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 DAZAP2Q15038 168 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 CLEC12AQ5QGZ9 265 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 PHYHD1Q5SRE7 291 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 C10orf128Q5T292 105 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 KLHL17Q6TDP4 642 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF813Q6ZN06 617 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF627Q7L945 461 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 DPPA2Q7Z7J5 298 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 SYT14Q8NB59 555 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ICA1LQ8NDH6 482 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 HDAC2Q92769 488 aaKnown RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 MCHR2Q969V1 340 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 RASD2Q96D21 266 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 ESRP2Q9H6T0 727 aaKnown RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 S100A14Q9HCY8 104 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 PAPOLBQ9NRJ5 636 aaKnown RBP10.68□□□□□ -0.7
SF3B3-208ENST00000567250 CELSR2Q9HCU4 2923 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 DCHS2Q6V1P9 2916 aa10.68□□□□□ -0.7
SF3B3-208ENST00000567250 PRSS37A4D1T9 235 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 H3BNX3 289 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 OSMP13725 252 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 B4GALT1P15291 398 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 NPR2P20594 1047 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 CAPZA2P47755 286 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 ARF1P84077 181 aaKnown RBP10.67□□□□□ -0.7
SF3B3-208ENST00000567250 MYBPC1Q00872 1141 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 TLE4Q04727 773 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 RUNX1T1Q06455 604 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 HIKESHIQ53FT3 197 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 AMIGO2Q86SJ2 522 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 TMEM200AQ86VY9 491 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 WDFY1Q8IWB7 410 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms