RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NR4A3Q92570 626 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 MTERF3Q96E29 417 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 C7orf34Q96L11 122 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 TBCDQ9BTW9 1192 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ACPTQ9BZG2 426 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 NDEL1Q9GZM8 345 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 C6orf62Q9GZU0 229 aaPredicted RBP3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SLC22A4Q9H015 551 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IKZF5Q9H5V7 419 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 DNAJC11Q9NVH1 559 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 IMPAD1Q9NX62 359 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 PTTG3PQ9NZH4 202 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 KLHL21Q9UJP4 597 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 ASB4Q9Y574 426 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 SLCO1B1Q9Y6L6 691 aa3.71□□□□□ -1.82
LINC00561-201ENST00000565815 CHD5Q8TDI0 1954 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 A0A1W2PNU3 283 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TNFRSF11BO00300 401 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ARHGEF9O43307 516 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GPR137BO60478 399 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 HCN1O60741 890 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CTSVO60911 334 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NME6O75414 186 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PGLSO95336 258 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 IGHEP01854 428 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ALPPP05187 535 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR56A5P0C7T3 313 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ADORA3P0DMS8 318 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SDC1P18827 310 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TCN2P20062 427 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 M6PRP20645 277 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PRKACGP22612 351 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DRD3P35462 400 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ARL16Q0P5N6 197 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NFATC2Q13469 925 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GPR50Q13585 617 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 C1DQ13901 141 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DGCR6Q14129 220 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 FZD2Q14332 565 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NFE2L1Q14494 772 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CDKN3Q16667 212 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NDUFA9Q16795 377 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 MICAQ29983 383 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM44Q2T9K0 475 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 IQCCQ4KMZ1 466 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DCAF10Q5QP82 559 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SLC25A30Q5SVS4 291 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR4F3Q6IEY1 312 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NOXRED1Q6NXP6 359 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SPNS3Q6ZMD2 512 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF767PQ75MW2 155 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ERN2Q76MJ5 926 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GDPD3Q7L5L3 318 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SERPINA9Q86WD7 417 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TCTE3Q8IZS6 198 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DCAF4L2Q8NA75 395 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR7G1Q8NGA0 311 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR10G2Q8NGC3 310 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CAPSLQ8WWF8 208 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GGHQ92820 318 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SPSB1Q96BD6 273 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SFXN2Q96NB2 322 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PANX1Q96RD7 426 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TAPBPLQ9BX59 468 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DNAJC4Q9NNZ3 241 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 VNN3Q9NY84 501 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ATP6V1HQ9UI12 483 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SNX7Q9UNH6 387 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ABCG2Q9UNQ0 655 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PPIL1Q9Y3C6 166 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 KLF2Q9Y5W3 355 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF106Q9H2Y7 1883 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ASXL3Q9C0F0 2248 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 WDFY4Q6ZS81 3184 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 IGLV3-16A0A075B6K0 115 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GLYATL1P3A0A0U1RQE8 302 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR6C76A6NM76 312 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SNTNA6NMZ2 147 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 H0YIV9 168 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SCAMP2O15127 329 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 NUDT21O43809 227 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 OR1I1O60431 355 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SDC3O75056 442 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 SLC25A14O95258 325 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PDYNP01213 254 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 DBTP11182 482 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CTSEP14091 401 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 GALP22466 123 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CSTF2P33240 577 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 PFN3P60673 137 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 KCNJ10P78508 379 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 CCL7P80098 99 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 MRPS15P82914 257 aaKnown RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 VLDLRP98155 873 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 IFITM2Q01629 132 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 RBPJQ06330 500 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 MLLT11Q13015 90 aaPredicted RBP3.7□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF273Q14593 569 aa3.7□□□□□ -1.82
LINC00561-201ENST00000565815 TAB1Q15750 504 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms