RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
SCAMP2-203ENST00000563663 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
SCAMP2-203ENST00000563663 LOC100506127A0A0U1RQW1 187 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 TMEM129A0AVI4 362 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF208O43345 1280 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 CHRNB4P30926 498 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 TGFBR1P36897 503 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 IFITM3Q01628 133 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 MYBPHQ13203 477 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 HBMQ6B0K9 141 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 CADM2Q8N3J6 435 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 LILRB4Q8NHJ6 448 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 RNF128Q8TEB7 428 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 RFKQ969G6 155 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 STUB1Q9UNE7 303 aa13.15□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF814B7Z6K7 855 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 GPX5O75715 221 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 UPK1BO75841 260 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 HMGN1P05114 100 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 IMPDH2P12268 514 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 CPEP16870 476 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 H3F3AP84243 136 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.315e-7■■■■□ 24.2
SCAMP2-203ENST00000563663 WDR88Q6ZMY6 472 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 TMPPEQ6ZT21 453 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 GDF7Q7Z4P5 450 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 GCNT2Q8N0V5 402 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 SLC41A3Q96GZ6 507 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 PTDSS2Q9BVG9 487 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 SP140LQ9H930 580 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 TAS2R16Q9NYV7 291 aa13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
SCAMP2-203ENST00000563663 CPSF4LA6NMK7 179 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 C19orf84I3L1E1 186 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 MYL12BO14950 172 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 HNRNPCP07910 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 GAAP10253 952 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 ENPP1P22413 925 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 GRNP28799 593 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 CRYBB2P43320 205 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 KIR2DL2P43627 348 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 DIO1P49895 249 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 MAP2K6P52564 334 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 RAC3P60763 192 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 RPS3AP61247 264 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 KRR1Q13601 381 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 TPBGQ13641 420 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 OR1Q1Q15612 314 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 LINC00114Q6XXX2 140 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 PLEKHG7Q6ZR37 379 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 RANBP3LQ86VV4 465 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 PHC2Q8IXK0 858 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 ZFP3Q96NJ6 502 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 OR5B2Q96R09 309 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 TM9SF2Q99805 663 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF426Q9BUY5 554 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 C12orf10Q9HB07 376 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 PAQR5Q9NXK6 330 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 CLEC2DQ9UHP7 191 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
SCAMP2-203ENST00000563663 A0A1W2PNV4 684 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 A1L4Q6 167 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 TRAPPC13A5PLN9 417 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 GJE1A6NN92 205 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 HSPB2A8KAH6 182 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF670-ZNF695F2Z2N8 137 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CLDN14O95500 239 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 MYL12AP19105 171 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CARD18P57730 90 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 HSPB2Q16082 182 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ABHD3Q8WU67 409 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 SERINC1Q9NRX5 453 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF629Q9UEG4 869 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 TACC2O95359 2948 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms