RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RSRC1Q96IZ7 334 aaKnown RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 ZNF75AQ96N20 296 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 GPX7Q96SL4 187 aaPredicted RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 KATNB1Q9BVA0 655 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CHID1Q9BWS9 393 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 TRIM15Q9C019 465 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 LRMDAQ9H2I8 198 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 ESRP2Q9H6T0 727 aaKnown RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 SEC61A2Q9H9S3 476 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 UBTD1Q9HAC8 227 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 NGBQ9NPG2 151 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 CCM2LQ9NUG4 571 aaPredicted RBP7.45□□□□□ -1.22
UBR1-204ENST00000563239 IL20RAQ9UHF4 553 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 ADAM18Q9Y3Q7 739 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 RNF115Q9Y4L5 304 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 UGT2A1Q9Y4X1 527 aa7.45□□□□□ -1.22
UBR1-204ENST00000563239 HIVEP1P15822 2718 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 CADP27708 2225 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 DHRS12A0PJE2 317 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 M0R1B8 84 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 TNFRSF11BO00300 401 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ABCD4O14678 606 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 IMPA2O14732 288 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 HS3ST1O14792 307 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 DHHO43323 396 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ATP5HO75947 161 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 NDUFB2O95178 105 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 WNT11O96014 354 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 GASTP01350 101 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 IGKV3-15P01624 115 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 RAF1P04049 648 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 CD3EP07766 207 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 CD14P08571 375 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 CELA3BP08861 270 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 B4GALT1P15291 398 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 FPR3P25089 353 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 PTAFRP25105 342 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ACVR1BP36896 505 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ERFP50548 548 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 CLRN1P58418 232 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 FMODQ06828 376 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 TOP3AQ13472 1001 aaPredicted RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 FLOT2Q14254 428 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ZNF672Q499Z4 452 aaPredicted RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 FAM98BQ52LJ0 330 aaKnown RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 MESTQ5EB52 335 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 C10orf128Q5T292 105 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 OR2T5Q6IEZ7 315 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 KLHL24Q6TFL4 600 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 TMEM108Q6UXF1 575 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 B3GLCTQ6Y288 498 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ZNF813Q6ZN06 617 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ASRGL1Q7L266 308 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 TMEM179BQ7Z7N9 219 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 SKA3Q8IX90 412 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ARIH2OSQ8N7S6 290 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ZNF611Q8N823 705 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 FAM169BQ8N8A8 192 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 PAPD5Q8NDF8 572 aaKnown RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 OR9Q2Q8NGE9 314 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 OR2T29Q8NH02 315 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 AKAP1Q92667 903 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBR1-204ENST00000563239 NINJ1Q92982 152 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 POP5Q969H6 163 aaKnown RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 UTP4Q969X6 686 aaKnown RBP7.44□□□□□ -1.22
UBR1-204ENST00000563239 MBD6Q96DN6 1003 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 LRGUKQ96M69 825 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 Q96M85 177 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 FOXB1Q99853 325 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ALG12Q9BV10 488 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 B3GAT2Q9NPZ5 323 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 NRIP3Q9NQ35 241 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 TMEM38BQ9NVV0 291 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 AURKCQ9UQB9 309 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 POFUT2Q9Y2G5 429 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
UBR1-204ENST00000563239 E7EQL1 145 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 H7C1C5 153 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 OR10H3O60404 316 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SLC2A10O95528 541 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 TXNDC12O95881 172 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 HLA-HP01893 362 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 TP53P04637 393 aaPredicted RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 SCG5P05408 212 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SOD3P08294 240 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CECR9P0C854 216 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 DANCRP0C864 163 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 PATE4P0C8F1 98 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CBR1P16152 277 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CDAP32320 146 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 RPL4P36578 427 aaKnown RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 RASSF2P50749 326 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 UBE2NP61088 152 aaKnown RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 LCN6P62502 163 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 TSPAN31Q12999 210 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CCNIQ14094 377 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 PGGHGQ32M88 737 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 RFX4Q33E94 735 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms