RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 HS6ST1O60243 411 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 STX11O75558 287 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 SNX4O95219 450 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 H6PDO95479 791 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ANGPTL1O95841 491 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 AGR2O95994 175 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 AK1P00568 194 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 NPPAP01160 153 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 IL12BP29460 328 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 CHI3L1P36222 383 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 PGM1P36871 562 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 UQCRFS1P47985 274 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 PSMD4P55036 377 aaKnown RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 CLDN15P56746 228 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 EEF1A1P68104 462 aaKnown RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 ZNF117Q03924 483 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 STX5Q13190 355 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 SKP2Q13309 424 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 CYLC2Q14093 348 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 FGFBP1Q14512 234 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 FCN2Q15485 313 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 MAPRE2Q15555 327 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 IGFBP7Q16270 282 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 MMEL1Q495T6 779 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 DCST1Q5T197 706 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 PDZK1Q5T2W1 519 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 GKAP1Q5VSY0 366 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 PRAMEF8Q5VWM4 474 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 PRAMEF7Q5VXH5 474 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 CBLN3Q6UW01 205 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 C6orf89Q6UWU4 347 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 CLEC18BQ6UXF7 455 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ANGPTL8Q6UXH0 198 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 B3GNT6Q6ZMB0 384 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 Q6ZPB1 254 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 SZRD1Q7Z422 152 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 HMGN2P46Q86SG4 172 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 PLCZ1Q86YW0 608 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ODF3L1Q8IXM7 274 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ZNF619Q8N2I2 560 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 SCCPDHQ8NBX0 429 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ST6GALNAC3Q8NDV1 305 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 OR8J3Q8NGG0 315 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 DUSP19Q8WTR2 217 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ARSGQ96EG1 525 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 GPR137Q96N19 417 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 TREX2Q9BQ50 279 aaPredicted RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 WFDC6Q9BQY6 131 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 DOHHQ9BU89 302 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 HOXD1Q9GZZ0 328 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 METTL7AQ9H8H3 244 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 POLE3Q9NRF9 147 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 UBQLN4Q9NRR5 601 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 OLAHQ9NV23 265 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 QPCTLQ9NXS2 382 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ALKBH4Q9NXW9 302 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 SPRR3Q9UBC9 169 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 ABCD2Q9UBJ2 740 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 MRTO4Q9UKD2 239 aaKnown RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 LIPT1Q9Y234 373 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 MRPS18CQ9Y3D5 142 aaKnown RBP4.03□□□□□ -1.76
SMG1-206ENST00000562668 L3MBTL1Q9Y468 752 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 TENM4Q6N022 2769 aa4.03□□□□□ -1.76
SMG1-206ENST00000562668 CNTRLQ7Z7A1 2325 aa4.03□□□□□ -1.77
SMG1-206ENST00000562668 NBPF19A0A087WUL8 3843 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 SERINC4A6NH21 518 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CCT8L1PA6NM43 557 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 NPIPA5E9PKD4 350 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 AIM2O14862 343 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 SCO2O43819 266 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TPST1O60507 370 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TPST2O60704 377 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CBR3O75828 277 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 DCTN3O75935 186 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 MFN2O95140 757 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 PGM3O95394 542 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ANP32DO95626 131 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 BCHEP06276 602 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 PABPC4LP0CB38 370 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ZNF24P17028 368 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CD53P19397 219 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 IL11P20809 199 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 PPIBP23284 216 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ELAVL4P26378 380 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 SRD5A2P31213 254 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CRATP43155 626 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 RFX3P48380 749 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 PSME3P61289 254 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ERVK11-1P61568 191 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 PPIAP62937 165 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 KCNJ2P63252 427 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 RPP38P78345 283 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 CDK6Q00534 326 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 DMTNQ08495 405 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms