RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 AKAP1Q92667 903 aaKnown RBP eCLIP14.34□□□□□ -0.115e-6■■■■□ 19.5
PKD1-226ENST00000562425 RSRC1Q96IZ7 334 aaKnown RBP14.34□□□□□ -0.11
PKD1-226ENST00000562425 FOXB1Q99853 325 aa14.34□□□□□ -0.11
PKD1-226ENST00000562425 MRPL13Q9BYD1 178 aaKnown RBP14.34□□□□□ -0.11
PKD1-226ENST00000562425 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
PKD1-226ENST00000562425 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
PKD1-226ENST00000562425 ZNF346Q9UL40 294 aaKnown RBP14.34□□□□□ -0.11
PKD1-226ENST00000562425 PRR14LQ5THK1 2151 aa14.33□□□□□ -0.11
PKD1-226ENST00000562425 TNFRSF11BO00300 401 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 MGRN1O60291 552 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 PTP4A3O75365 173 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 TRMUO75648 421 aaKnown RBP14.33□□□□□ -0.12
PKD1-226ENST00000562425 ATE1O95260 518 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 CD14P08571 375 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 ARR3P36575 388 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 ACVR1BP36896 505 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 CAPZA2P47755 286 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 TOP3AQ13472 1001 aaPredicted RBP14.33□□□□□ -0.12
PKD1-226ENST00000562425 FHL1Q13642 323 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 HIST3H3Q16695 136 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 C3orf36Q3SXR2 165 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 OR2T5Q6IEZ7 315 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 LRFN4Q6PJG9 635 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 SLC22A25Q6T423 547 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
PKD1-226ENST00000562425 SYT14Q8NB59 555 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 OR2T29Q8NH02 315 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 MCHR2Q969V1 340 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 MBD6Q96DN6 1003 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 RBP7Q96R05 134 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 KCNS3Q9BQ31 491 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 ALG12Q9BV10 488 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 CADM1Q9BY67 442 aaKnown RBP14.33□□□□□ -0.12
PKD1-226ENST00000562425 NELFAQ9H3P2 528 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 DENND2DQ9H6A0 471 aaPredicted RBP14.33□□□□□ -0.12
PKD1-226ENST00000562425 YY1AP1Q9H869 796 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 REEP1Q9H902 201 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 SMURF2Q9HAU4 748 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 GRHPRQ9UBQ7 328 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 POU2F3Q9UKI9 436 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 POMPQ9Y244 141 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 SIGLEC7Q9Y286 467 aa14.33□□□□□ -0.12
PKD1-226ENST00000562425 DHRS12A0PJE2 317 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 TMCC2O75069 709 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 SEC14L2O76054 403 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 FARS2O95363 451 aaKnown RBP14.32□□□□□ -0.12
PKD1-226ENST00000562425 OR8G3PP0DMU2 310 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 CBR1P16152 277 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 FPR3P25089 353 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 RUNX1T1Q06455 604 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 CD47Q08722 323 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 GK3PQ14409 553 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 ZNF672Q499Z4 452 aaPredicted RBP14.32□□□□□ -0.12
PKD1-226ENST00000562425 THEM4Q5T1C6 240 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 GPR139Q6DWJ6 353 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 DPPA2Q7Z7J5 298 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 ZER1Q7Z7L7 766 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 IGFN1Q86VF2 1251 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 SPATA24Q86W54 205 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 ARIH2OSQ8N7S6 290 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 GNPDA2Q8TDQ7 276 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 FBXW5Q969U6 566 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 SLC38A2Q96QD8 506 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 KCNK17Q96T54 332 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 LYVE1Q9Y5Y7 322 aa14.32□□□□□ -0.12
PKD1-226ENST00000562425 FLNAP21333 2647 aaKnown RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 XKRYO14609 159 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 AHCYL1O43865 530 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 CRYAAP02489 173 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 B4GALT1P15291 398 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 CD53P19397 219 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 GUCA1AP43080 201 aaPredicted RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 ERVK-25P63136 954 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 TUBA1BP68363 451 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 TUBA4AP68366 448 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 MYBPC1Q00872 1141 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 DEFB113Q30KQ7 82 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 NRN1LQ496H8 165 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 C1orf94Q6P1W5 598 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 SMARCD3Q6STE5 483 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 DPY19L2P2Q6ZN68 376 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 TUBA1AQ71U36 451 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 TGIF2LYQ8IUE0 185 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 ADGRG5Q8IZF4 528 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 KBTBD8Q8NFY9 601 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 LILRB1Q8NHL6 650 aaPredicted RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 HDAC2Q92769 488 aaKnown RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 TSPAN32Q96QS1 320 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 CCL19Q99731 98 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 CHID1Q9BWS9 393 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 FAIMQ9NVQ4 179 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 TMEM38BQ9NVV0 291 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 CISD1Q9NZ45 108 aaKnown RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 CRNNQ9UBG3 495 aaPredicted RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 FBXL3Q9UKT7 428 aa14.31□□□□□ -0.12
PKD1-226ENST00000562425 SAMHD1Q9Y3Z3 626 aaKnown RBP14.31□□□□□ -0.12
PKD1-226ENST00000562425 ROS1P08922 2347 aa14.3□□□□□ -0.12
PKD1-226ENST00000562425 SHISA9B4DS77 424 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms