RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MLF2Q15773 248 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 BCL2A1Q16548 175 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TAL2Q16559 108 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 C5orf64Q2M2E5 130 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 RPEL1Q2QD12 228 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 BSXQ3C1V8 233 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 PARP15Q460N3 678 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TECRLQ5HYJ1 363 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MS4A13Q5J8X5 152 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 RBM48Q5RL73 367 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 UTF1Q5T230 341 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CCNJQ5T5M9 372 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GPRC6AQ5T6X5 926 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NADSYN1Q6IA69 706 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF425Q6IV72 752 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 FAHD1Q6P587 224 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TRIM40Q6P9F5 258 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SLC25A47Q6Q0C1 308 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4L9Q6RFH8 374 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 GDPD4Q6W3E5 623 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 C12orf54Q6X4T0 127 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ASCL4Q6XD76 172 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ADAMTSL5Q6ZMM2 481 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DNM1P46Q6ZS02 220 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 BHLHA9Q7RTU4 235 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 PEX26Q7Z412 305 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 PTAR1Q7Z6K3 402 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 TMEM150AQ86TG1 271 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 KCNMB4Q86W47 210 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CATSPER3Q86XQ3 398 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 LACC1Q8IV20 430 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR2L13Q8N349 312 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF441Q8N8Z8 693 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF114Q8NC26 417 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR8G5Q8NG78 346 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR56A4Q8NGH8 313 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR10G7Q8NGN6 311 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OR2T6Q8NHC8 308 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 LNX1Q8TBB1 728 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 ENKURQ8TC29 256 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZPLD1Q8TCW7 415 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SETD7Q8WTS6 366 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 GATAD1Q8WUU5 269 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NUDCD2Q8WVJ2 157 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TFB1MQ8WVM0 346 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 BAALCQ8WXS3 180 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DNASE2BQ8WZ79 361 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NEIL2Q969S2 332 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 OTUB2Q96DC9 234 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TMEM80Q96HE8 168 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CEP19Q96LK0 163 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CCDC42Q96M95 316 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SERPINB12Q96P63 405 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MS4A4EQ96PG1 132 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SCGB3A2Q96PL1 93 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GPR21Q99679 349 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 FOXC2Q99958 501 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MRPL45Q9BRJ2 306 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF426Q9BUY5 554 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DERL2Q9GZP9 239 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ELOVL4Q9GZR5 314 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GLIPR2Q9H4G4 154 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DHX35Q9H5Z1 703 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 FNDC4Q9H6D8 234 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 UBE2ZQ9H832 354 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 MOB1AQ9H8S9 216 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 FOLH1BQ9HBA9 442 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ZNF334Q9HCZ1 680 aaPredicted RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 PARD6AQ9NPB6 346 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 KCNJ16Q9NPI9 418 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MRPL40Q9NQ50 206 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 SPHK2Q9NRA0 654 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CTPS2Q9NRF8 586 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ADARB2Q9NS39 739 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 DEPPQ9NTK1 212 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 EXD2Q9NVH0 621 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 FKBP14Q9NWM8 211 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 GIN1Q9NXP7 522 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NUDT4Q9NZJ9 180 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 THYN1Q9P016 225 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 DUX4Q9UBX2 424 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 RARRES3Q9UL19 164 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CLEC4EQ9ULY5 219 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 MMP17Q9ULZ9 603 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ING4Q9UNL4 249 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 SAMD4AQ9UPU9 718 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 RCL1Q9Y2P8 373 aaKnown RBP1.73□□□□□ -2.13
RTF1-207ENST00000561076 PPIL1Q9Y3C6 166 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TNFRSF18Q9Y5U5 241 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CPQQ9Y646 472 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 CSNK1G3Q9Y6M4 447 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 ATP10AO60312 1499 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NCAPD3P42695 1498 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 COL4A3Q01955 1670 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 TAF1P21675 1872 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 NESP48681 1621 aa1.73□□□□□ -2.13
RTF1-207ENST00000561076 POLR3AO14802 1390 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 CNTNAP1P78357 1384 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RAB3GAP2Q9H2M9 1393 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms