RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LAS2Q8IYD9 372 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 GPR65Q8IYL9 337 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM123Q8N131 208 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RYBPQ8N488 228 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF383Q8NA42 475 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM71CQ8NEG0 241 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 OR9K2Q8NGE7 335 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 OR5D13Q8NGL4 314 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 OR2AJ1Q8NGZ0 328 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 GNPDA2Q8TDQ7 276 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ACOT12Q8WYK0 555 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 FBXO17Q96EF6 278 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 NIPSNAP1Q9BPW8 284 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 MAPKAP1Q9BPZ7 522 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TBL1YQ9BQ87 522 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TOLLIPQ9H0E2 274 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 OR2AG1Q9H205 316 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 KLHL31Q9H511 634 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 A0A1W2PPE3 182 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CPED1A4D0V7 1026 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PRR23D1E9PI22 279 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TNFRSF11BO00300 401 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PRKYO43930 277 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 IGF2P01344 180 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PRR23D2P0DMB1 279 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ADRB3P13945 408 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 AKR1A1P14550 325 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CPN1P15169 458 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 KDELR2P33947 212 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 NPBWR1P48145 328 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RABGGTBP53611 331 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 NUTF2P61970 127 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TLE3Q04726 772 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SKP2Q13309 424 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 EXT1Q16394 746 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SPANXN4Q5MJ08 99 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 LIPJQ5W064 366 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 LHX8Q68G74 356 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 KCNIP4Q6PIL6 250 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CD200R1LQ6Q8B3 271 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 NPSR1Q6W5P4 371 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SERPINA11Q86U17 422 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 LRRC28Q86X40 367 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SIAH3Q8IW03 269 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 GPR135Q8IZ08 494 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM130Q8N3G9 435 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 TOMM5Q8N4H5 51 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 LKAAEAR1Q8TD35 194 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PIH1D2Q8WWB5 315 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF354BQ96LW1 612 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RAB40CQ96S21 281 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 UBTD1Q9HAC8 227 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 DNAJC4Q9NNZ3 241 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PNO1Q9NRX1 252 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 FLRT1Q9NZU1 646 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RHCGQ9UBD6 479 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF629Q9UEG4 869 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 YARS2Q9Y2Z4 477 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SPIN1Q9Y657 262 aaPredicted RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF638Q14966 1978 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 A0A087WV48 116 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 GFYI3L273 518 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 IMPA2O14732 288 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SCN2BO60939 215 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 MED6O75586 246 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 GATBO75879 557 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 NCR1O76036 304 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 VPREB1P12018 145 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 ABOP16442 354 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 CRABP1P29762 137 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DDTP30046 118 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 CXCR3P49682 368 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SNRPGP62308 76 aaKnown RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 FABP5Q01469 135 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 EGR4Q05215 589 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SREBF2Q12772 1141 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 TCF15Q12870 199 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 MELKQ14680 651 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PTGR1Q14914 329 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RBBP7Q16576 425 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 DUOXA1Q1HG43 343 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 RFTN2Q52LD8 501 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 XKR4Q5GH76 650 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SPATA46Q5T0L3 261 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 H3F3CQ6NXT2 135 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PAQR6Q6TCH4 344 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC29A4Q7RTT9 530 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF551Q7Z340 670 aaPredicted RBP6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 C15orf54Q8N8G6 183 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR56A4Q8NGH8 313 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR5J2Q8NH18 312 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SPATA22Q8NHS9 363 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 SOCS4Q8WXH5 440 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 C14orf79Q96F83 325 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 HMCESQ96FZ2 354 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 OR52E6Q96RD3 313 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 PIGQQ9BRB3 760 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 C20orf85Q9H1P6 137 aa6.09□□□□□ -1.43
TSPAN3-209ENST00000560715 BEX1Q9HBH7 125 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms