RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 SERPINA5P05154 406 aa8.8□□□□□ -1
LDLR-214ENST00000560628 VIMP08670 466 aaKnown RBP8.8□□□□□ -1
LDLR-214ENST00000560628 PGA4P0DJD7 388 aa8.8□□□□□ -1
LDLR-214ENST00000560628 PGA3P0DJD8 388 aa8.8□□□□□ -1
LDLR-214ENST00000560628 OR8G3PP0DMU2 310 aa8.8□□□□□ -1
LDLR-214ENST00000560628 CCL2P13500 99 aa8.8□□□□□ -1
LDLR-214ENST00000560628 IGFBP5P24593 272 aa8.8□□□□□ -1
LDLR-214ENST00000560628 IL2RGP31785 369 aa8.8□□□□□ -1
LDLR-214ENST00000560628 GLRXP35754 106 aa8.8□□□□□ -1
LDLR-214ENST00000560628 AQP2P41181 271 aa8.8□□□□□ -1
LDLR-214ENST00000560628 UGT2B15P54855 530 aa8.8□□□□□ -1
LDLR-214ENST00000560628 CLRN1P58418 232 aa8.8□□□□□ -1
LDLR-214ENST00000560628 SRSF2Q01130 221 aaKnown RBP8.8□□□□□ -1
LDLR-214ENST00000560628 GALK2Q01415 458 aa8.8□□□□□ -1
LDLR-214ENST00000560628 RPL18Q07020 188 aaKnown RBP8.8□□□□□ -1
LDLR-214ENST00000560628 LAPTM4AQ15012 233 aa8.8□□□□□ -1
LDLR-214ENST00000560628 MAD2L1BPQ15013 274 aaPredicted RBP8.8□□□□□ -1
LDLR-214ENST00000560628 FAM120AOSQ5T036 256 aa8.8□□□□□ -1
LDLR-214ENST00000560628 CGB2Q6NT52 195 aa8.8□□□□□ -1
LDLR-214ENST00000560628 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
LDLR-214ENST00000560628 PHC2Q8IXK0 858 aa8.8□□□□□ -1
LDLR-214ENST00000560628 ZNF786Q8N393 782 aa8.8□□□□□ -1
LDLR-214ENST00000560628 OR4K5Q8NGD3 323 aa8.8□□□□□ -1
LDLR-214ENST00000560628 OR8J3Q8NGG0 315 aa8.8□□□□□ -1
LDLR-214ENST00000560628 TMEM255BQ8WV15 326 aa8.8□□□□□ -1
LDLR-214ENST00000560628 RASSF5Q8WWW0 418 aa8.8□□□□□ -1
LDLR-214ENST00000560628 SGTBQ96EQ0 304 aa8.8□□□□□ -1
LDLR-214ENST00000560628 ZNF583Q96ND8 569 aa8.8□□□□□ -1
LDLR-214ENST00000560628 ZNF347Q96SE7 839 aa8.8□□□□□ -1
LDLR-214ENST00000560628 ZNF426Q9BUY5 554 aa8.8□□□□□ -1
LDLR-214ENST00000560628 SLC19A3Q9BZV2 496 aa8.8□□□□□ -1
LDLR-214ENST00000560628 OR51B6Q9H340 312 aa8.8□□□□□ -1
LDLR-214ENST00000560628 C20orf141Q9NUB4 165 aa8.8□□□□□ -1
LDLR-214ENST00000560628 TMEM38BQ9NVV0 291 aa8.8□□□□□ -1
LDLR-214ENST00000560628 TMEM160Q9NX00 188 aa8.8□□□□□ -1
LDLR-214ENST00000560628 MYEF2Q9P2K5 600 aaKnown RBP8.8□□□□□ -1
LDLR-214ENST00000560628 LPAR3Q9UBY5 353 aa8.8□□□□□ -1
LDLR-214ENST00000560628 DUSP13Q9UII6 198 aa8.8□□□□□ -1
LDLR-214ENST00000560628 FBXO9Q9UK97 447 aaPredicted RBP8.8□□□□□ -1
LDLR-214ENST00000560628 BAG5Q9UL15 447 aa8.8□□□□□ -1
LDLR-214ENST00000560628 MALRD1Q5VYJ5 2156 aa8.79□□□□□ -1
LDLR-214ENST00000560628 A0A1W2PRG6 482 aa8.79□□□□□ -1
LDLR-214ENST00000560628 MCIDASD6RGH6 385 aa8.79□□□□□ -1
LDLR-214ENST00000560628 M0R233 179 aa8.79□□□□□ -1
LDLR-214ENST00000560628 SYNGR3O43761 229 aa8.79□□□□□ -1
LDLR-214ENST00000560628 LILRA1O75019 489 aa8.79□□□□□ -1
LDLR-214ENST00000560628 TRMUO75648 421 aaKnown RBP8.79□□□□□ -1
LDLR-214ENST00000560628 OR7A10O76100 309 aa8.79□□□□□ -1
LDLR-214ENST00000560628 IFNA14P01570 189 aa8.79□□□□□ -1
LDLR-214ENST00000560628 IGHG1P01857 330 aa8.79□□□□□ -1
LDLR-214ENST00000560628 MT-ND1P03886 318 aa8.79□□□□□ -1
LDLR-214ENST00000560628 FAM157BP0CG42 384 aa8.79□□□□□ -1
LDLR-214ENST00000560628 COL8A2P25067 703 aa8.79□□□□□ -1
LDLR-214ENST00000560628 GIFP27352 417 aa8.79□□□□□ -1
LDLR-214ENST00000560628 EVX1P49640 407 aa8.79□□□□□ -1
LDLR-214ENST00000560628 TRIP10Q15642 601 aa8.79□□□□□ -1
LDLR-214ENST00000560628 FXNQ16595 210 aa8.79□□□□□ -1
LDLR-214ENST00000560628 ALKBH6Q3KRA9 238 aa8.79□□□□□ -1
LDLR-214ENST00000560628 LRRC23Q53EV4 343 aaPredicted RBP8.79□□□□□ -1
LDLR-214ENST00000560628 CYBRD1Q53TN4 286 aa8.79□□□□□ -1
LDLR-214ENST00000560628 ZNF584Q8IVC4 421 aa8.79□□□□□ -1
LDLR-214ENST00000560628 LRRC18Q8N456 261 aa8.79□□□□□ -1
LDLR-214ENST00000560628 PAQR4Q8N4S7 273 aaPredicted RBP8.79□□□□□ -1
LDLR-214ENST00000560628 MOSPD2Q8NHP6 518 aa8.79□□□□□ -1
LDLR-214ENST00000560628 TMEM239Q8WW34 195 aa8.79□□□□□ -1
LDLR-214ENST00000560628 TMEM158Q8WZ71 300 aa8.79□□□□□ -1
LDLR-214ENST00000560628 MCHR2Q969V1 340 aa8.79□□□□□ -1
LDLR-214ENST00000560628 TPD52L3Q96J77 140 aa8.79□□□□□ -1
LDLR-214ENST00000560628 SNX18Q96RF0 628 aa8.79□□□□□ -1
LDLR-214ENST00000560628 REPIN1Q9BWE0 567 aaKnown RBP8.79□□□□□ -1
LDLR-214ENST00000560628 DENND2DQ9H6A0 471 aaPredicted RBP8.79□□□□□ -1
LDLR-214ENST00000560628 INIPQ9NRY2 104 aa8.79□□□□□ -1
LDLR-214ENST00000560628 GMPR2Q9P2T1 348 aaKnown RBP8.79□□□□□ -1
LDLR-214ENST00000560628 ATRQ13535 2644 aa8.78□□□□□ -1
LDLR-214ENST00000560628 A0A1W2PPW3 197 aa8.78□□□□□ -1
LDLR-214ENST00000560628 BBIP1A8MTZ0 92 aa8.78□□□□□ -1
LDLR-214ENST00000560628 PIP5K1CO60331 668 aa8.78□□□□□ -1
LDLR-214ENST00000560628 OR5F1O95221 314 aa8.78□□□□□ -1
LDLR-214ENST00000560628 FARS2O95363 451 aaKnown RBP8.78□□□□□ -1
LDLR-214ENST00000560628 NPPAP01160 153 aa8.78□□□□□ -1
LDLR-214ENST00000560628 HPXP02790 462 aa8.78□□□□□ -1
LDLR-214ENST00000560628 NAT2P11245 290 aa8.78□□□□□ -1
LDLR-214ENST00000560628 ACADSP16219 412 aa8.78□□□□□ -1
LDLR-214ENST00000560628 SRD5A1P18405 259 aa8.78□□□□□ -1
LDLR-214ENST00000560628 FUT4P22083 530 aa8.78□□□□□ -1
LDLR-214ENST00000560628 APEX1P27695 318 aaKnown RBP8.78□□□□□ -1
LDLR-214ENST00000560628 CDAP32320 146 aa8.78□□□□□ -1
LDLR-214ENST00000560628 LSP1P33241 339 aa8.78□□□□□ -1
LDLR-214ENST00000560628 KDELR2P33947 212 aa8.78□□□□□ -1
LDLR-214ENST00000560628 RBM34P42696 430 aaKnown RBP8.78□□□□□ -1
LDLR-214ENST00000560628 YAP1P46937 504 aaKnown RBP8.78□□□□□ -1
LDLR-214ENST00000560628 ZNF84P51523 738 aa8.78□□□□□ -1
LDLR-214ENST00000560628 CHN2P52757 468 aa8.78□□□□□ -1
LDLR-214ENST00000560628 RIN1Q13671 783 aa8.78□□□□□ -1
LDLR-214ENST00000560628 CCNIQ14094 377 aa8.78□□□□□ -1
LDLR-214ENST00000560628 MAPRE2Q15555 327 aa8.78□□□□□ -1
LDLR-214ENST00000560628 CR1LQ2VPA4 569 aa8.78□□□□□ -1
LDLR-214ENST00000560628 COQ5Q5HYK3 327 aa8.78□□□□□ -1
LDLR-214ENST00000560628 ELFN2Q5R3F8 820 aa8.78□□□□□ -1
LDLR-214ENST00000560628 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms