RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 FAM215AQ9Y5M1 114 aa4.63□□□□□ -1.67
SPG11-220ENST00000559933 ORC6Q9Y5N6 252 aa4.63□□□□□ -1.67
SPG11-220ENST00000559933 GMPPBQ9Y5P6 360 aa4.63□□□□□ -1.67
SPG11-220ENST00000559933 TEP1Q99973 2627 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 FAM208BQ5VWN6 2430 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 LOC100130705A0A1B0GUX0 176 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 A0A1W2PNV4 684 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SH3D21A4FU49 640 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC22A20A6NK97 555 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 GJE1A6NN92 205 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ZNF716A6NP11 495 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 DCTN6O00399 190 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SURF4O15260 269 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR2T1O43869 369 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 FZD7O75084 574 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SEC14L2O76054 403 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 TOXO94900 526 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ACTL6AO96019 429 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 IGF2P01344 180 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ADRA2AP08913 450 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 MRPL3P09001 348 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 ABOP16442 354 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 GABRB1P18505 474 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 GSTM3P21266 225 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC6A6P31641 620 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PYCR1P32322 319 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PTGS2P35354 604 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ACVR1BP36896 505 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 CDKN2AP42771 156 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 SELENOPP49908 381 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 RAD23AP54725 363 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 FOXG1P55316 489 aaPredicted RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 CLDN17P56750 224 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 RAC3P60763 192 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ESRRGP62508 458 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC35A1P78382 337 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 H3F3AP84243 136 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 IL5RAQ01344 420 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PIGFQ07326 219 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.62□□□□□ -1.67
SPG11-220ENST00000559933 CD47Q08722 323 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 FOXF2Q12947 444 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 C1DQ13901 141 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC17A1Q14916 467 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 TAF11Q15544 211 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ETFDHQ16134 617 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 IGFBP7Q16270 282 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ZNF362Q5T0B9 420 aaPredicted RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 C9orf135Q5VTT2 229 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC27A4Q6P1M0 643 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NIPAL3Q6P499 406 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PLBD1Q6P4A8 553 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ARHGAP11AQ6P4F7 1023 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 LEG1Q6P5S2 330 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PAQR6Q6TCH4 344 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 GFRALQ6UXV0 394 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NHLRC1Q6VVB1 395 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 USP51Q70EK9 711 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC35D2Q76EJ3 337 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 LINGO2Q7L985 606 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SHFQ7M4L6 423 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NUFIP2Q7Z417 695 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 TUSC5Q8IXB3 177 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 PM20D2Q8IYS1 436 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 LINC00471Q8N535 108 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ZIC4Q8N9L1 334 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SYT14Q8NB59 555 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC37A3Q8NCC5 494 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NAXEQ8NCW5 288 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ZNF555Q8NEP9 628 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR2T33Q8NG76 320 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR9K2Q8NGE7 335 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR52L1Q8NGH7 329 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR52E2Q8NGJ4 325 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR51L1Q8NGJ5 315 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 OR6S1Q8NH40 331 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 FAM57AQ8TBR7 257 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 CPT1CQ8TCG5 803 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 RNF128Q8TEB7 428 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 LIPHQ8WWY8 451 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 HDAC2Q92769 488 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 GPX7Q96SL4 187 aaPredicted RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 NMNAT3Q96T66 252 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 ANKRD60Q9BZ19 345 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 TTTY10Q9BZA0 68 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 VCX3BQ9H321 246 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 RERGLQ9H628 205 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 CALHM2Q9HA72 323 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 SLC25A19Q9HC21 320 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 AMBNQ9NP70 447 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NRIP3Q9NQ35 241 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 HINT3Q9NQE9 182 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 MRPL39Q9NYK5 338 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 IL20Q9NYY1 176 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 CLCF1Q9UBD9 225 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 NDRG4Q9ULP0 352 aaKnown RBP4.62□□□□□ -1.67
SPG11-220ENST00000559933 PCDHB10Q9UN67 800 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms