RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 EIF3KQ9UBQ5 218 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TRAV36DV7A0A075B6V5 113 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ANKRD20A5PA0PJZ0 165 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 MEIS3P1A6NDR6 274 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 SUSD5O60279 629 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ECDO95905 644 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 SPARCP09486 303 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 FBLP22087 321 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 CSNK1EP49674 416 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 RAG2P55895 527 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ANGPT1Q15389 498 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ELAVL1Q15717 326 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ZBTB37Q5TC79 503 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 YOD1Q5VVQ6 348 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 FGD2Q7Z6J4 655 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 OR51D1Q8NGF3 324 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 OTOSQ8NHW6 89 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 TSEN15Q8WW01 171 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 METTL21AQ8WXB1 218 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 C4orf45Q96LM5 186 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 COMMD4Q9H0A8 199 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 NOX3Q9HBY0 568 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 SLC2A4RGQ9NR83 387 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 MRPL22Q9NWU5 206 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 MRTO4Q9UKD2 239 aaKnown RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 ELF5Q9UKW6 265 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-216ENST00000559819 PCDHGA5Q9Y5G8 931 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 MTCH2Q9Y6C9 303 aa9.07□□□□□ -0.96
LRRC28-216ENST00000559819 XKRYO14609 159 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 SLC16A7O60669 478 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 SLC25A12O75746 678 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 PNPP00491 289 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 RAF1P04049 648 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ALDOBP05062 364 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 TPOP07202 933 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 RAB40ALP0C0E4 278 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GP1BBP13224 206 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GLULP15104 373 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CSRP1P21291 193 aaKnown RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MAPK3P27361 379 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ABCD3P28288 659 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OR3A3P47888 321 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 SLC6A8P48029 635 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF81P51508 661 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 EGR3Q06889 387 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MFGE8Q08431 387 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ARHGAP40Q5TG30 622 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GPR139Q6DWJ6 353 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ASPHD2Q6ICH7 369 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 TEX261Q6UWH6 196 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF782Q6ZMW2 699 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 RAB40AQ8WXH6 277 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ACTR6Q9GZN1 396 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CA10Q9NS85 328 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 U3KQ87 197 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 TMED7-TICAM2A0A0A6YYA0 188 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 LMO7DNF2Z398 122 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MEN1O00255 615 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 NOS1APO75052 506 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF217O75362 1048 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GLSO94925 669 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 KDM4BO94953 1096 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MPZL1O95297 269 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CTLA4P16410 223 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 IGFBP4P22692 258 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CCKBRP32239 447 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CSF2RBP32927 897 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 NUDT1P36639 197 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 BLVRAP53004 296 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 CBFBQ13951 182 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OLFML2AQ68BL7 652 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MAMDC2Q7Z304 686 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF227Q86WZ6 799 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OR8H3Q8N146 312 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OR52B4Q8NGK2 314 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GPR148Q8TDV2 347 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 HGDQ93099 445 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 OR1F2PQ96R84 312 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 GAL3ST1Q99999 423 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 VN1R1Q9GZP7 353 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF304Q9HCX3 659 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MRPL39Q9NYK5 338 aaKnown RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 AKAP7Q9P0M2 348 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-216ENST00000559819 MGAT4CQ9UBM8 478 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF69Q9UC07 566 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 STEAP1Q9UHE8 339 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 TMED7Q9Y3B3 224 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 LAMA1P25391 3075 aa9.06□□□□□ -0.96
LRRC28-216ENST00000559819 IGHV1OR21-1A0A087WYE8 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms