RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GPR35Q9HC97 309 aa5□□□□□ -1.61
USP3-215ENST00000559771 SPAG4Q9NPE6 437 aa5□□□□□ -1.61
USP3-215ENST00000559771 GID8Q9NWU2 228 aa5□□□□□ -1.61
USP3-215ENST00000559771 ADPRHL2Q9NX46 363 aa5□□□□□ -1.61
USP3-215ENST00000559771 B3GNT2Q9NY97 397 aa5□□□□□ -1.61
USP3-215ENST00000559771 ZNF224Q9NZL3 707 aa5□□□□□ -1.61
USP3-215ENST00000559771 NDUFA13Q9P0J0 144 aa5□□□□□ -1.61
USP3-215ENST00000559771 KCNS2Q9ULS6 477 aa5□□□□□ -1.61
USP3-215ENST00000559771 ZNF443Q9Y2A4 671 aaPredicted RBP5□□□□□ -1.61
USP3-215ENST00000559771 IGHV2OR16-5A0A0B4J2B6 119 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ZNF587BE7ETH6 402 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MS4A18H0YCH9 400 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 WNT9BO14905 357 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 DENRO43583 198 aaKnown RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 TRAF3IP2O43734 574 aaPredicted RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 TPST2O60704 377 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 SEC14L2O76054 403 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 VAMP5O95183 116 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 BAG2O95816 211 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 HPRP00739 348 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CRYAAP02489 173 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 BCHEP06276 602 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 C8BP07358 591 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ZCCHC18P0CG32 403 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 NR2F1P10589 423 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 HLA-DOBP13765 273 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 DAOP14920 347 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 UQCRBP14927 111 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CBR1P16152 277 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 HTR2AP28223 471 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 RPS5P46782 204 aaKnown RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 CLDN17P56750 224 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 PSME3P61289 254 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 SNRPD2P62316 118 aaKnown RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 TXNL4AP83876 142 aaKnown RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 MED21Q13503 144 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CARTPTQ16568 116 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CEACAM16Q2WEN9 425 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MS4A18Q3C1V0 323 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MMEL1Q495T6 779 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ELFN2Q5R3F8 820 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 OGFRL1Q5TC84 451 aaPredicted RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 PRAMEF8Q5VWM4 474 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 PRAMEF7Q5VXH5 474 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 TMEM225Q6GV28 225 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 C8orf82Q6P1X6 216 aaPredicted RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 VHLLQ6RSH7 139 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 KLHL24Q6TFL4 600 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 FKBP9P1Q75LS8 142 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 SLC46A3Q7Z3Q1 461 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ARPINQ7Z6K5 226 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CARM1Q86X55 608 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MSRB3Q8IXL7 192 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 PEX5LQ8IYB4 626 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ZNF440Q8IYI8 595 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MIER2Q8N344 545 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ZNF786Q8N393 782 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CADM2Q8N3J6 435 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ICA1LQ8NDH6 482 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 OR9I1Q8NGQ6 314 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MFSD8Q8NHS3 518 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 STK35Q8TDR2 534 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MAL2Q969L2 176 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 TAAR8Q969N4 342 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 TMEM19Q96HH6 336 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CLPTM1LQ96KA5 538 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 OR2M2Q96R28 347 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 SNX18Q96RF0 628 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 CDRT15Q96T59 188 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 SPATA9Q9BWV2 254 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 PAIP1Q9H074 479 aaKnown RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 RACGAP1Q9H0H5 632 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 ZNF442Q9H7R0 627 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 TPT1P8Q9HAU6 139 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 BCL2L10Q9HD36 194 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 MYOZ1Q9NP98 299 aaPredicted RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 SDR39U1Q9NRG7 319 aaPredicted RBP4.99□□□□□ -1.61
USP3-215ENST00000559771 RAB26Q9ULW5 256 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 RCE1Q9Y256 329 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 RASD1Q9Y272 281 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 AP3M1Q9Y2T2 418 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 FKBP7Q9Y680 259 aa4.99□□□□□ -1.61
USP3-215ENST00000559771 A0A096LPI6 279 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 A0A0G2JPF8 293 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 LOC102725191A0A1B0GVB3 256 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 AQP12BA6NM10 295 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 HNRNPCL2B2RXH8 293 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 HNRNPCL3B7ZW38 293 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 H3BNX3 289 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 RFXANKO14593 260 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ACOT8O14734 319 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 TPST1O60507 370 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 KRT75O95678 551 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 HLA-HP01893 362 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ADRA2AP08913 450 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 HNRNPCL4P0DMR1 293 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 UMPSP11172 480 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 FCGR1AP12314 374 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms