RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 GPANK1O95872 356 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 PSKH1P11801 424 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF708P17019 499 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 PAICSP22234 425 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 HCCSP53701 268 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ETFDHQ16134 617 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 KLHL22Q53GT1 634 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SYT6Q5T7P8 510 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 RNLSQ5VYX0 342 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ANKRD13BQ86YJ7 626 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 OR2V1Q8NHB1 315 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 OXGR1Q96P68 337 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 TAAR6Q96RI8 345 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 TSPAN10Q9H1Z9 355 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 AKIP1Q9NQ31 210 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF99A8MXY4 864 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SBK2P0C263 348 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 C1QTNF9P0C862 333 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 CTLA4P16410 223 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC16A1P53985 500 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 BIDP55957 195 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 RAC3P60763 192 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 RPS7P62081 194 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 C3AR1Q16581 482 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 TBR1Q16650 682 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 EEF1A1P5Q5VTE0 462 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 OTPQ5XKR4 325 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 HBMQ6B0K9 141 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 GPAT4Q86UL3 456 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SVOPQ8N4V2 548 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 NANOGP1Q8N7R0 232 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ZIC4Q8N9L1 334 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF485Q8NCK3 441 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 TPRP12270 2363 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 IGLV1-36A0A0B4J1U3 117 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SNTNA6NMZ2 147 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 GJE1A6NN92 205 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNHIT1O43257 154 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SELENOFO60613 162 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NTF4P34130 210 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SERPINB10P48595 397 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 CARD18P57730 90 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 FMODQ06828 376 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC10A1Q14973 349 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 Q6ZS92 163 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 LHFPL3Q86UP9 236 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ROBO4Q8WZ75 1007 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SNX18Q96RF0 628 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ALG12Q9BV10 488 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 MRPL13Q9BYD1 178 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NDEL1Q9GZM8 345 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ING1Q9UK53 422 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NOX1Q9Y5S8 564 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 MAP1BP46821 2468 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NPIPA5E9PKD4 350 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 LINC01387J3KSC0 135 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 GLCEO94923 617 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF24P17028 368 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 TGFBR2P37173 567 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 EIF1AXP47813 144 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 CSNK2A1P68400 391 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SPCS2Q15005 226 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 VASNQ6EMK4 673 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SSX6Q7RTT6 188 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ZBTB46Q86UZ6 589 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ZADH2Q8N4Q0 377 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 SYT14Q8NB59 555 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NEIL3Q8TAT5 605 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 RORBQ92753 470 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 EXTL1Q92935 676 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 FOXN4Q96NZ1 517 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 TBX5Q99593 518 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 JAM3Q9BX67 310 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 NPIPA1Q9UND3 350 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
RABGGTA-209ENST00000559551 TLN1Q9Y490 2541 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms