RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MFSD8Q8NHS3 518 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 VANGL1Q8TAA9 524 aaPredicted RBP6.36□□□□□ -1.39
SPG11-213ENST00000558988 BCL2L2Q92843 193 aaPredicted RBP6.36□□□□□ -1.39
SPG11-213ENST00000558988 SLC38A4Q969I6 547 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 TAAR8Q969N4 342 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 C7orf26Q96N11 449 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 EMC6Q9BV81 110 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 PTDSS2Q9BVG9 487 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 SPATA5L1Q9BVQ7 753 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CRLF2Q9HC73 371 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 ANGPT4Q9Y264 503 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 FKBP7Q9Y680 259 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 IGKV1D-42A0A075B6H8 117 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TRAV36DV7A0A075B6V5 113 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OR6C65A6NJZ3 312 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 EVPLLA8MZ36 301 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 FTCDNL1E5RQL4 147 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 LRRN3E7EW58 273 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 C11orf98E9PRG8 122 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 H7C417 338 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 AIM2O14862 343 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TLX2O43763 284 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 FAM20BO75063 409 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 NPIPB7O75200 414 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 HPRP00739 348 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OR4A8P0C604 315 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 HLA-DOBP13765 273 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 ETS2P15036 469 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 B4GALT1P15291 398 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 SLC25A16P16260 332 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 USF1P22415 310 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 PPIBP23284 216 aaKnown RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 AHCYP23526 432 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 CALCRP30988 508 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 PRKAR1BP31321 381 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 SERPINF1P36955 418 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 PDLIM4P50479 330 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 EFNA4P52798 201 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 SLC18A1P54219 525 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MTPNP58546 118 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 DSCR9P59020 149 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 NAAAQ02083 359 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 POU3F1Q03052 451 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 PIGFQ07326 219 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 PMS2P3Q13401 168 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 SQLEQ14534 574 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OR1Q1Q15612 314 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 ZSWIM7Q19AV6 140 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TTMPQ5BVD1 217 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 C6orf52Q5T4I8 152 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 FAM69AQ5T7M9 428 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 KRT80Q6KB66 452 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 ANKRD16Q6P6B7 361 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 H1FNTQ75WM6 255 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 SPATA21Q7Z572 469 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 DHDDSQ86SQ9 333 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MDP1Q86V88 176 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MYPOPQ86VE0 399 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 RANBP3LQ86VV4 465 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 ARMC8Q8IUR7 673 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 FUNDC1Q8IVP5 155 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 UEVLDQ8IX04 471 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 SVOPLQ8N434 492 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OR6N1Q8NGY5 312 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 C10orf105Q8TEF2 133 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TXNDC15Q96J42 360 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 ATP6V1G3Q96LB4 118 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OXGR1Q96P68 337 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MOGAT1Q96PD6 335 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 OR2M2Q96R28 347 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TNFRSF13CQ96RJ3 184 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 ZNF607Q96SK3 696 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MCHR1Q99705 422 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 PIMREGQ9BSJ6 248 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 RSPO3Q9BXY4 272 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 IKZF5Q9H5V7 419 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 TMEM27Q9HBJ8 222 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 GPR35Q9HC97 309 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 BCL2L10Q9HD36 194 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 DYNLRB1Q9NP97 96 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 CA10Q9NS85 328 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 MED29Q9NX70 200 aa6.35□□□□□ -1.39
SPG11-213ENST00000558988 NSD1Q96L73 2696 aaPredicted RBP6.35□□□□□ -1.39
SPG11-213ENST00000558988 ARFGEF3Q5TH69 2177 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 TRBV23-1A0A0A0MS06 115 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 PRORSD1PA6NEY8 169 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 CPSF4LA6NMK7 179 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 hCG_2039718K7EN88 272 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ANGPT2O15123 496 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 OR2T1O43869 369 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SERPINB7O75635 380 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 IFNA2P01563 188 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 HLA-HP01893 362 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 CSF3P09919 207 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 IGHV4-31P0DP07 118 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 UMPSP11172 480 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 APEHP13798 732 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms