RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SLC22A24Q8N4F4 322 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 HIST1H2ACQ93077 130 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 ZNF566Q969W8 418 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 LRRC58Q96CX6 371 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SH3GL3Q99963 347 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 PLA2G12AQ9BZM1 189 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SLC19A3Q9BZV2 496 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 TPK1Q9H3S4 243 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 MS4A5Q9H3V2 200 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 VIPAS39Q9H9C1 493 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 DYNLRB1Q9NP97 96 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 TMEM38BQ9NVV0 291 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 MYEF2Q9P2K5 600 aaKnown RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 ZNF229Q9UJW7 825 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SPEF1Q9Y4P9 236 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 UBL3O95164 117 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 RAB36O95755 333 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 BCL10O95999 233 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 ERCC1P07992 297 aaPredicted RBP9.89□□□□□ -0.83
CASC4-205ENST00000558735 H2AFXP16104 143 aaPredicted RBP9.89□□□□□ -0.83
CASC4-205ENST00000558735 FUT1P19526 365 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 TNFRSF1BP20333 461 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 ALDH3B1P43353 468 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 CHN2P52757 468 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 TRIP10Q15642 601 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 ELFN2Q5R3F8 820 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 CARM1Q86X55 608 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 ECSITQ9BQ95 431 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 SYT3Q9BQG1 590 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 SIKE1Q9BRV8 207 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 TMEM120AQ9BXJ8 343 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 MRPL13Q9BYD1 178 aaKnown RBP9.89□□□□□ -0.83
CASC4-205ENST00000558735 FZR1Q9UM11 496 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 SH3GLB1Q9Y371 365 aa9.89□□□□□ -0.83
CASC4-205ENST00000558735 M0R233 179 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 FXYD1O00168 92 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 SHOX2O60902 331 aaPredicted RBP9.88□□□□□ -0.83
CASC4-205ENST00000558735 SASH3O75995 380 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 HPXP02790 462 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 MT-ND1P03886 318 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 F13BP05160 661 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 UMPSP11172 480 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 CCL2P13500 99 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 CFPP27918 469 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 OR1E2P47887 323 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 UGT2B15P54855 530 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 MYBPC1Q00872 1141 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 GALK2Q01415 458 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 KLF10Q13118 480 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 PIN1Q13526 163 aaPredicted RBP9.88□□□□□ -0.83
CASC4-205ENST00000558735 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 MAD2L1BPQ15013 274 aaPredicted RBP9.88□□□□□ -0.83
CASC4-205ENST00000558735 CR1LQ2VPA4 569 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 GKAP1Q5VSY0 366 aaPredicted RBP9.88□□□□□ -0.83
CASC4-205ENST00000558735 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
CASC4-205ENST00000558735 OR4K5Q8NGD3 323 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 PFN4Q8NHR9 129 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 TMEM255BQ8WV15 326 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 RASSF5Q8WWW0 418 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 LIPHQ8WWY8 451 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 HPS1Q92902 700 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 C1orf159Q96HA4 380 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 SNX18Q96RF0 628 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 ZNF347Q96SE7 839 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 SEPHS2Q99611 448 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 SH3GL1Q99961 368 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 C20orf141Q9NUB4 165 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 DUSP13Q9UII6 198 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 RIMS3Q9UJD0 308 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 FBXL3Q9UKT7 428 aa9.88□□□□□ -0.83
CASC4-205ENST00000558735 LOC100653049A0A140TA62 436 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 TCF21O43680 179 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 TRMUO75648 421 aaKnown RBP9.87□□□□□ -0.83
CASC4-205ENST00000558735 KRT34O76011 436 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 OR7A10O76100 309 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 CLPTM1O96005 669 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 NPPAP01160 153 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 TSPAN19P0C672 248 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 NAT2P11245 290 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 ACADSP16219 412 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 APEX1P27695 318 aaKnown RBP9.87□□□□□ -0.83
CASC4-205ENST00000558735 AQP2P41181 271 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 ZNF133P52736 654 aaPredicted RBP9.87□□□□□ -0.83
CASC4-205ENST00000558735 RPL18Q07020 188 aaKnown RBP9.87□□□□□ -0.83
CASC4-205ENST00000558735 SF3A3Q12874 501 aaKnown RBP eCLIP9.87□□□□□ -0.83
CASC4-205ENST00000558735 NANOGNBQ7Z5D8 188 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 LINC01356Q8N9X3 169 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 SYT14Q8NB59 555 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 SLC30A7Q8NEW0 376 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 OR8J3Q8NGG0 315 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 MOSPD2Q8NHP6 518 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 ZFAND2BQ8WV99 257 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 TMEM239Q8WW34 195 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 YIPF5Q969M3 257 aa9.87□□□□□ -0.83
CASC4-205ENST00000558735 RACGAP1Q9H0H5 632 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms