RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ASB6Q9NWX5 421 aa9.23□□□□□ -0.93
TPM1-212ENST00000558347 ERVK13-1Q9NX77 482 aa9.23□□□□□ -0.93
TPM1-212ENST00000558347 DNAJB12Q9NXW2 375 aaKnown RBP9.23□□□□□ -0.93
TPM1-212ENST00000558347 SPIN1Q9Y657 262 aaPredicted RBP9.23□□□□□ -0.93
TPM1-212ENST00000558347 CELSR1Q9NYQ6 3014 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 ALG1L2C9J202 215 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 FAM47E-STBD1D6RA91 191 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 RGS13O14921 159 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 KLF4O43474 513 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 SCO2O43819 266 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 FADS1O60427 444 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 CCNKO75909 580 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 IGHA1P01876 353 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 KRT8P05787 483 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 HPGDP15428 266 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 HTR1FP30939 366 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 SDC2P34741 201 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 EVI2BP34910 448 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 TIMP3P35625 211 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 HTR3AP46098 478 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 GFRA1P56159 465 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 DLX5P56178 289 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 BDH1Q02338 343 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 TLE4Q04727 773 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 FOXD4Q12950 439 aaPredicted RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 HNRNPA0Q13151 305 aaKnown RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 PGGHGQ32M88 737 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 CCDC92Q53HC0 331 aaPredicted RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 AADACL4Q5VUY2 407 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 NSUN5P2Q63ZY6 315 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 POMZP3Q6PJE2 187 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 PAQR6Q6TCH4 344 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 MBOAT2Q6ZWT7 520 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 RANBP3LQ86VV4 465 aaPredicted RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 LAX1Q8IWV1 398 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 RELL2Q8NC24 303 aaPredicted RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 ZNF485Q8NCK3 441 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 OR8D4Q8NGM9 314 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 CNOT9Q92600 299 aaKnown RBP9.22□□□□□ -0.93
TPM1-212ENST00000558347 TRIB1Q96RU8 372 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 MCHR1Q99705 422 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 PLA2G12AQ9BZM1 189 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 TAS2R10Q9NYW0 307 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 IL20Q9NYY1 176 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 ZNF221Q9UK13 617 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 CDH10Q9Y6N8 788 aa9.22□□□□□ -0.93
TPM1-212ENST00000558347 HSPB2A8KAH6 182 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 SURF4O15260 269 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 FRS3O43559 492 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 AKAP8O43823 692 aaKnown RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 ACTL6AO96019 429 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 CSTAP01040 98 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 HLA-DQB1P01920 261 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 LIMS3P0CW19 117 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 LIMS4P0CW20 117 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 BMP5P22003 454 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 TCEA1P23193 301 aaKnown RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 SRD5A2P31213 254 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 DDOSTP39656 456 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 SLC1A3P43003 542 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 STARP49675 285 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 LHX2P50458 406 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 CDH11P55287 796 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 RIN1Q13671 783 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 SNTB1Q13884 538 aaKnown RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 HSPB2Q16082 182 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 SLC25A35Q3KQZ1 300 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 RSBN1Q5VWQ0 802 aaPredicted RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 NXNL2Q5VZ03 156 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 C22orf42Q6IC83 251 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 TMEM53Q6P2H8 277 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 PLXDC2Q6UX71 529 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 FAM131AQ6UXB0 335 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 APOOLQ6UXV4 268 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 PLEKHM3Q6ZWE6 761 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ZNF550Q7Z398 422 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 BCDIN3DQ7Z5W3 292 aaKnown RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 MISPQ8IVT2 679 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 GID4Q8IVV7 300 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 KLHL36Q8N4N3 616 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 CELF2-AS1Q8N7Q2 184 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ZNF614Q8N883 585 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 FADS6Q8N9I5 356 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 OR6F1Q8NGZ6 308 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ZNF486Q96H40 463 aaPredicted RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 SNX18Q96RF0 628 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ZNF559Q9BR84 538 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 MIXL1Q9H2W2 232 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 FN3KQ9H479 309 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 EGLN3Q9H6Z9 239 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 MCCC2Q9HCC0 563 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ABCB9Q9NP78 766 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 C14orf119Q9NWQ9 140 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 PPP4R1LQ9P1A2 415 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 DKKL1Q9UK85 242 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 ADAM30Q9UKF2 790 aa9.21□□□□□ -0.93
TPM1-212ENST00000558347 RPH3AQ9Y2J0 694 aaPredicted RBP9.21□□□□□ -0.93
TPM1-212ENST00000558347 PCNX3Q9H6A9 2034 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 HRNRQ86YZ3 2850 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms