RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-234ENST00000557703 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
SHMT2-234ENST00000557703 CACNA1DQ01668 2161 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 M0R3G1 203 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 CTAG2O75638 210 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 TIPRLO75663 272 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 RAD51DO75771 328 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 QDPRP09417 244 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 OR8G3PP0DMU2 310 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 PTAFRP25105 342 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 COL8A1P27658 744 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 NOS3P29474 1203 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 CRABP1P29762 137 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 KPNB1Q14974 876 aaKnown RBP12.01□□□□□ -0.49
SHMT2-234ENST00000557703 TAB1Q15750 504 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 LRFN4Q6PJG9 635 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 PARP8Q8N3A8 854 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 OR9Q2Q8NGE9 314 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 FOXB1Q99853 325 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 NTN4Q9HB63 628 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 RASSF1Q9NS23 344 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 VSX1Q9NZR4 365 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-234ENST00000557703 SLC25A15Q9Y619 301 aa12.01□□□□□ -0.49
SHMT2-234ENST00000557703 PRSS37A4D1T9 235 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 G3V2T6 193 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 THBDP07204 575 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF26P17031 533 aaPredicted RBP12□□□□□ -0.49
SHMT2-234ENST00000557703 FXYD6P3P58550 94 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 ERVK-25P63136 954 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 MRPS34P82930 218 aaKnown RBP12□□□□□ -0.49
SHMT2-234ENST00000557703 ARF1P84077 181 aaKnown RBP12□□□□□ -0.49
SHMT2-234ENST00000557703 TLE4Q04727 773 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 CD47Q08722 323 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 MELKQ14680 651 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 TBRG1Q3YBR2 411 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 CARD17Q5XLA6 110 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 TMEM108Q6UXF1 575 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 LINGO2Q7L985 606 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 LNX2Q8N448 690 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 OR2T33Q8NG76 320 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 HDAC2Q92769 488 aaKnown RBP12□□□□□ -0.49
SHMT2-234ENST00000557703 NMD3Q96D46 503 aaKnown RBP12□□□□□ -0.49
SHMT2-234ENST00000557703 TSPAN32Q96QS1 320 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 IFT27Q9BW83 186 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 SIAEQ9HAT2 523 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 VNN3Q9NY84 501 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 IER3IP1Q9Y5U9 82 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 DCHS2Q6V1P9 2916 aa12□□□□□ -0.49
SHMT2-234ENST00000557703 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 CADP27708 2225 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ROS1P08922 2347 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ARHGEF9O43307 516 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 OSMP13725 252 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ARR3P36575 388 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 CENPAP49450 140 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ESRRGP62508 458 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ANKRD34AQ69YU3 496 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 FAHD1Q6P587 224 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF813Q6ZN06 617 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ATG16L2Q8NAA4 619 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 TEX47Q8TBZ9 253 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 STMN2Q93045 179 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 SAMD8Q96LT4 415 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 Q96M85 177 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ERMAPQ96PL5 475 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-234ENST00000557703 GABARAPL1Q9H0R8 117 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 TMEM38BQ9NVV0 291 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 CRNNQ9UBG3 495 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-234ENST00000557703 ADAM18Q9Y3Q7 739 aa11.99□□□□□ -0.49
SHMT2-234ENST00000557703 SLC22A23A1A5C7 686 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 DEFB108AA8MXU0 73 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 BHLHE40O14503 412 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 TMCC2O75069 709 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 UBL3O95164 117 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 RENP00797 406 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PTHP01270 115 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 IFNGP01579 166 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 HRGP04196 525 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 HMGN1P05114 100 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 CBR1P16152 277 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PCBD1P61457 104 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 RUNX1T1Q06455 604 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 TOP3AQ13472 1001 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-234ENST00000557703 SLC36A2Q495M3 483 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PHYHD1Q5SRE7 291 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 NCMAPQ5T1S8 102 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms