RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZNF426Q9BUY5 554 aa11.16□□□□□ -0.62
PSEN1-219ENST00000556951 HDHD5Q9BXW7 423 aa11.16□□□□□ -0.62
PSEN1-219ENST00000556951 YTHDF1Q9BYJ9 559 aaKnown RBP11.16□□□□□ -0.62
PSEN1-219ENST00000556951 SLC19A3Q9BZV2 496 aa11.16□□□□□ -0.62
PSEN1-219ENST00000556951 CISD1Q9NZ45 108 aaKnown RBP11.16□□□□□ -0.62
PSEN1-219ENST00000556951 CMYA5Q8N3K9 4069 aa11.16□□□□□ -0.62
PSEN1-219ENST00000556951 A0A0J9YW62 118 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 UNC119BA6NIH7 251 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 EIF1AYO14602 144 aaKnown RBP11.15□□□□□ -0.62
PSEN1-219ENST00000556951 CXCL13O43927 109 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 CLIC3O95833 236 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 NUDT14O95848 222 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 OPN1LWP04000 364 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 LYNP07948 512 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 IFI30P13284 250 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 SRD5A1P18405 259 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 POU1F1P28069 291 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 EPHA2P29317 976 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 AGTR1P30556 359 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 GGT2P36268 569 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 HTR3AP46098 478 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 ISL1P61371 349 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
PSEN1-219ENST00000556951 QPRTQ15274 297 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-219ENST00000556951 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 BPIFA2Q96DR5 249 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 FAM46AQ96IP4 442 aaKnown RBP11.15□□□□□ -0.62
PSEN1-219ENST00000556951 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 PRRG4Q9BZD6 226 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
PSEN1-219ENST00000556951 ZAR1LA6NP61 321 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 EFCAB9A8MZ26 197 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 H3BN98 237 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 PIP5K1CO60331 668 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 TNFAIP8O95379 198 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 IGF2P01344 180 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 MAKP20794 623 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 CXCR1P25024 350 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 TACR3P29371 465 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 POLR2HP52434 150 aaKnown RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 DSCR9P59020 149 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 MYBPC1Q00872 1141 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 TOMM34Q15785 309 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 TFAP2EQ6VUC0 442 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 PFN4Q8NHR9 129 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 FBLIM1Q8WUP2 373 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 ST8SIA1Q92185 356 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 HTRA1Q92743 480 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 OSTF1Q92882 214 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 KLHDC3Q9BQ90 382 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 FANCFQ9NPI8 374 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 MEPEQ9NQ76 525 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 PCDHGB5Q9Y5G0 923 aa11.14□□□□□ -0.63
PSEN1-219ENST00000556951 EPPK1P58107 5090 aaKnown RBP11.14□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 GMFGO60234 142 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 SLC25A16P16260 332 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 GPR4P46093 362 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 GIPRP48546 466 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 NUDT6P53370 316 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 CDC42P60953 191 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 IL5RAQ01344 420 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 CD47Q08722 323 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 CDK5R2Q13319 367 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 TOP3AQ13472 1001 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-219ENST00000556951 GINS1Q14691 196 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 FAM120AOSQ5T036 256 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 GRINAQ7Z429 371 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF786Q8N393 782 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 LRRC17Q8N6Y2 441 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF524Q96C55 264 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 CACNG6Q9BXT2 260 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 NGBQ9NPG2 151 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 C20orf141Q9NUB4 165 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 NPAP1Q9NZP6 1156 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 OSGIN1Q9UJX0 560 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 CDH10Q9Y6N8 788 aa11.13□□□□□ -0.63
PSEN1-219ENST00000556951 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
PSEN1-219ENST00000556951 A0A087WZY1 265 aa11.12□□□□□ -0.63
PSEN1-219ENST00000556951 TMED7-TICAM2A0A0A6YYA0 188 aa11.12□□□□□ -0.63
PSEN1-219ENST00000556951 E7EQL1 145 aa11.12□□□□□ -0.63
PSEN1-219ENST00000556951 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-219ENST00000556951 KPNA4O00629 521 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-219ENST00000556951 MPZL2O60487 215 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms