RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TCTEX1D4Q5JR98 221 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 EOGTQ5NDL2 527 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 GPRC6AQ5T6X5 926 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 OR2G6Q5TZ20 316 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 SLC8B1Q6J4K2 584 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 C8orf74Q6P047 294 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 PAMR1Q6UXH9 720 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 UNQ9370/PRO34162Q6UXP9 181 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 C3orf62Q6ZUJ4 267 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 TMEM179BQ7Z7N9 219 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 BIVMQ86UB2 503 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF677Q86XU0 584 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 CDC20BQ86Y33 519 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 IQCKQ8N0W5 287 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 AGR3Q8TD06 166 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 BRSK1Q8TDC3 778 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 SETD7Q8WTS6 366 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 TSEN15Q8WW01 171 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 OR1E3Q8WZA6 343 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 STARD8Q92502 1023 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 SLC35B4Q969S0 331 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 DGCR14Q96DF8 476 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 TM4SF19Q96DZ7 209 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 CMTM7Q96FZ5 175 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ANKRD36BP1Q96IX9 119 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 C8orf76Q96K31 380 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 FOXN4Q96NZ1 517 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 MBOAT4Q96T53 435 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 NICN1Q9BSH3 213 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 NAT9Q9BTE0 207 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 C20orf24Q9BUV8 137 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 DEFB126Q9BYW3 111 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 POLR2J2Q9GZM3 115 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 POLR2J3Q9H1A7 115 aaKnown RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ZDHHC11Q9H8X9 412 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 PARVGQ9HBI0 331 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 MARCH5Q9NX47 278 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 GCNT4Q9P109 453 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 PITPNC1Q9UKF7 332 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ASF1AQ9Y294 204 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 UGT2A1Q9Y4X1 527 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 AK9Q5TCS8 1911 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 WDR62O43379 1518 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 SBNO1A3KN83 1393 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 ABCC12Q96J65 1359 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 FANCAO15360 1455 aa3.22□□□□□ -1.89
PRPF39-210ENST00000556718 COL5A2P05997 1499 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-210ENST00000556718 WDR19Q8NEZ3 1342 aa3.21□□□□□ -1.89
PRPF39-210ENST00000556718 EIF4G3O43432 1585 aaKnown RBP3.21□□□□□ -1.89
PRPF39-210ENST00000556718 NPATQ14207 1427 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 RALGAPA1Q6GYQ0 2036 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 NSG1A0A0A6YYJ2 146 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 SERTM2A0A1B0GWG4 89 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 CASC3O15234 703 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 CLOCKO15516 846 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 HCRTR1O43613 425 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 H6PDO95479 791 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 APOEP02649 317 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 FGF4P08620 206 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 UBTFL1P0CB47 393 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 NPR2P20594 1047 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 PRDX3P30048 256 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 S100A5P33763 92 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 RFX3P48380 749 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 GSSP48637 474 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 BLVRAP53004 296 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 DIO3P55073 304 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 RPL26P61254 145 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 MRPS22P82650 360 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 PPIL2Q13356 520 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 CHRNA6Q15825 494 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 KYAT1Q16773 422 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ISXQ2M1V0 245 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 SLC25A30Q5SVS4 291 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 UTF1Q5T230 341 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 TMEM53Q6P2H8 277 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 TMIGD1Q6UXZ0 262 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 RDH10Q8IZV5 341 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 GTPBP8Q8N3Z3 284 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 B3GNT7Q8NFL0 401 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 OR10G3Q8NGC4 313 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 OR51S1Q8NGJ8 323 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ACMSDQ8TDX5 336 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 SNF8Q96H20 258 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ZIM3Q96PE6 472 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 XPO6Q96QU8 1125 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 SORT1Q99523 831 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 P2RY13Q9BPV8 354 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 KCTD14Q9BQ13 255 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 Q9H521 79 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF702PQ9H963 129 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 TMBIM4Q9HC24 238 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 GLRX2Q9NS18 164 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 DDX18Q9NVP1 670 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 EURLQ9NYK6 297 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 IL20Q9NYY1 176 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms