RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MAPK11Q15759 364 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 MS4A18Q3C1V0 323 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 KLHL36Q8N4N3 616 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 OR1J2Q8NGS2 313 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 TXLNGYQ9BZA5 131 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 C1orf198Q9H425 327 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 PPCSQ9HAB8 311 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 INSIG2Q9Y5U4 225 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
ACTN1-219ENST00000556432 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-219ENST00000556432 IQCMA0A1B0GVH7 501 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 MDFIC2A0A1B0GVS7 189 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 HOXA3O43365 443 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-219ENST00000556432 PTHP01270 115 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 IGHV4-38-2P0DP08 117 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF12P17014 697 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 CCNOP22674 350 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 BIDP55957 195 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 DSTNP60981 165 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 PLP2Q04941 152 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 ALG10BQ5I7T1 473 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
ACTN1-219ENST00000556432 SPATA46Q5T0L3 261 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 OLFML2AQ68BL7 652 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 PARP8Q8N3A8 854 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 SPICQ8N5J4 248 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 SLC38A5Q8WUX1 472 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 ZIM3Q96PE6 472 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 EPYCQ99645 322 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 NPHS2Q9NP85 383 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 MKS1Q9NXB0 559 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 IFT52Q9Y366 437 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 CHST2Q9Y4C5 530 aa11.77□□□□□ -0.53
ACTN1-219ENST00000556432 IGKV1D-42A0A075B6H8 117 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 A0A1B0GWA3 101 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 C11orf98E9PRG8 122 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 RFXANKO14593 260 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 FZD7O75084 574 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 UBOX5O94941 541 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 SNAP29O95721 258 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 IGHV3-13P01766 116 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 APLNRP35414 380 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 NCALDP61601 193 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 HSF2Q03933 536 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 SLC36A2Q495M3 483 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 ESCO2Q56NI9 601 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 C6orf89Q6UWU4 347 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 RBM15BQ8NDT2 890 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 OR4K5Q8NGD3 323 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 GEMIN6Q8WXD5 167 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 TEX37Q96LM6 180 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 ZBTB18Q99592 522 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 RBM4BQ9BQ04 359 aaKnown RBP11.76□□□□□ -0.53
ACTN1-219ENST00000556432 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 TCF7L2Q9NQB0 619 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 NPTNQ9Y639 398 aa11.76□□□□□ -0.53
ACTN1-219ENST00000556432 TRAV40A0A0B4J280 105 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 A0A0G2JPF8 293 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 ZSCAN5BA6NJL1 495 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 HNRNPCL2B2RXH8 293 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 HNRNPCL3B7ZW38 293 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 TM9SF1O15321 606 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
ACTN1-219ENST00000556432 TGDSO95455 350 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 ANP32DO95626 131 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 HNRNPCL4P0DMR1 293 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 LBPP18428 481 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 UFM1P61960 85 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 LRRC74AQ0VAA2 488 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF718Q3SXZ3 478 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 FBLN7Q53RD9 439 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 CEP85LQ5SZL2 805 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 DPPA2Q7Z7J5 298 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF781Q8N8C0 355 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 IPCEF1Q8WWN9 437 aaPredicted RBP11.75□□□□□ -0.53
ACTN1-219ENST00000556432 CITED1Q99966 193 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 RHOXF2Q9BQY4 288 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 TMEM38BQ9NVV0 291 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 GLTPQ9NZD2 209 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms