RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 KCNK17Q96T54 332 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 KCNS3Q9BQ31 491 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 TEKT2Q9UIF3 430 aa13.19□□□□□ -0.3
VPS33B-205ENST00000556096 FREM2Q5SZK8 3169 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 EML6Q6ZMW3 1958 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 LOC102725191A0A1B0GVB3 256 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TVP23AA6NH52 213 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 MAGEB4O15481 346 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 SULT1C4O75897 302 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 PMS2P2O95744 297 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 SERPINA3P01011 423 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 CLEC2LP0C7M8 214 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 ALOX5APP20292 161 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TCEA1P23193 301 aaKnown RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 SLC35A1P78382 337 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 POU3F1Q03052 451 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 MXD1Q05195 221 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 EGR3Q06889 387 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 RPTNQ6XPR3 784 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TMPPEQ6ZT21 453 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TEX19Q8NA77 164 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 RPS4Y2Q8TD47 263 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 GHSRQ92847 366 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TTTY10Q9BZA0 68 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 STMN3Q9NZ72 180 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 PLEKHB1Q9UF11 243 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-205ENST00000556096 LAMP5Q9UJQ1 280 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 DKKL1Q9UK85 242 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 GRIP1Q9Y3R0 1128 aa13.18□□□□□ -0.3
VPS33B-205ENST00000556096 A0A1W2PNR3 127 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 HSPB2A8KAH6 182 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 G3V3Y1 287 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 CTDSP2O14595 271 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 CASKO14936 926 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 GPRIN2O60269 458 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 CTLA4P16410 223 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 SHC1P29353 583 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 SRD5A2P31213 254 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 MTNR1BP49286 362 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 C19orf57Q0VDD7 668 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 HNRNPA0Q13151 305 aaKnown RBP13.17□□□□□ -0.3
VPS33B-205ENST00000556096 TGIF1Q15583 401 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 HSPB2Q16082 182 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 DCAF10Q5QP82 559 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 PAMR1Q6UXH9 720 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 BTLAQ7Z6A9 289 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 CCDC190Q86UF4 302 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 OR6N2Q8NGY6 317 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 JSRP1Q96MG2 331 aaPredicted RBP13.17□□□□□ -0.3
VPS33B-205ENST00000556096 WDFY2Q96P53 400 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 PIGQQ9BRB3 760 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 TMEM185BQ9H7F4 350 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 ACOXLQ9NUZ1 547 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 KLHL13Q9P2N7 655 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
VPS33B-205ENST00000556096 MRPS18CQ9Y3D5 142 aaKnown RBP13.17□□□□□ -0.3
VPS33B-205ENST00000556096 OR2M5A3KFT3 312 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 PRR32B1ATL7 298 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 SULT2B1O00204 365 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 CNR1P21554 472 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 EDNRAP25101 427 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 SFTPDP35247 375 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 PTGS2P35354 604 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
VPS33B-205ENST00000556096 AIMP2Q13155 320 aaKnown RBP13.16□□□□□ -0.3
VPS33B-205ENST00000556096 INSL4Q14641 139 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 DPY19L4Q7Z388 723 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 IL22RA1Q8N6P7 574 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 OTOSQ8NHW6 89 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 AP3S1Q92572 193 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 TXNDC15Q96J42 360 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 FER1L6-AS2Q96M78 137 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 OXGR1Q96P68 337 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 MRM2Q9UI43 246 aaKnown RBP13.16□□□□□ -0.3
VPS33B-205ENST00000556096 KLHDC2Q9Y2U9 406 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 ZFHX4Q86UP3 3567 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 TRBV2A0A0J9YWF9 115 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
VPS33B-205ENST00000556096 ZNF593O00488 134 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-205ENST00000556096 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms