RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 A0A087WV48 116 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 IGHV5-51A0A0C4DH38 117 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 TEX51A0A1B0GUA7 166 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 RPS10-NUDT3A0A1W2PQS6 291 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 SHISA7A6NL88 538 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 ALG1L2C9J202 215 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 NDUFB5O43674 189 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 DDAH2O95865 285 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 MAS1P04201 325 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 PGCP20142 388 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 DCTDP32321 178 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 KIR3DL2P43630 455 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 RPS15P62841 145 aaKnown RBP12.21□□□□□ -0.46
SHMT2-222ENST00000555774 ZDHHC12Q96GR4 267 aa12.21□□□□□ -0.46
SHMT2-222ENST00000555774 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 M0R233 179 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 HCRTR2O43614 444 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 OR2A4O95047 310 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 MPC2O95563 127 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 IGHMP01871 453 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 M6PRP20645 277 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 LBX1P52954 281 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 GFERP55789 205 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 RAB14P61106 215 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 TSPAN5P62079 268 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SLC17A1Q14916 467 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 RBMS2Q15434 407 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 GRK1Q15835 563 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PM20D2Q8IYS1 436 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 CARFQ8N187 725 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 LMX1AQ8TE12 382 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 CLIP3Q96DZ5 547 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 VSX1Q9NZR4 365 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PIPOXQ9P0Z9 390 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF69Q9UC07 566 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 CDV3Q9UKY7 258 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PRKNO60260 465 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 TSPAN2O60636 221 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF217O75362 1048 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SLC25A12O75746 678 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 GP1BBP13224 206 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PSMA6P60900 246 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 RPL27P61353 136 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ROM1Q03395 351 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 WDR38Q5JTN6 314 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 HLA-DQA1Q5Y7H0 255 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SIGIRRQ6IA17 410 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SLC18B1Q6NT16 456 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF679Q8IYX0 411 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 RNF128Q8TEB7 428 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 TSEN15Q8WW01 171 aaKnown RBP12.2□□□□□ -0.46
SHMT2-222ENST00000555774 METTL21AQ8WXB1 218 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PIGKQ92643 395 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 ZNF524Q96C55 264 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 B9D1Q9UPM9 204 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
SHMT2-222ENST00000555774 OR2M5A3KFT3 312 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PRSS37A4D1T9 235 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 CTAG2O75638 210 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 ALDOBP05062 364 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 SSTR2P30874 369 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 CSF2RBP32927 897 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 LTBRP36941 435 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 POLR2HP52434 150 aaKnown RBP12.19□□□□□ -0.46
SHMT2-222ENST00000555774 RAB11BQ15907 218 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 TEX30Q5JUR7 227 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 C5orf46Q6UWT4 87 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 SYT13Q7L8C5 426 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 TSLPQ969D9 159 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 RBP7Q96R05 134 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 GAL3ST4Q96RP7 486 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 ELOVL3Q9HB03 270 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 SLCO1B1Q9Y6L6 691 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 C5orf42Q9H799 3197 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 LOC100289279A0A1B0GTE1 492 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 A0A1B0GTH9 108 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 TCRBV16S1A1N1A0A5B0 115 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PLSCR5A0PG75 271 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 OR6C76A6NM76 312 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 A8MUA0 341 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 H3BMH7 237 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 SLC17A2O00624 439 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 ANXA7P20073 488 aaKnown RBP12.19□□□□□ -0.46
SHMT2-222ENST00000555774 CD27P26842 260 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PPM1FP49593 454 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PNLIPRP2P54317 469 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 DLX5P56178 289 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 OPCMLQ14982 345 aa12.19□□□□□ -0.46
SHMT2-222ENST00000555774 PCGF3Q3KNV8 242 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms