RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VSTM4Q8IW00 320 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ZADH2Q8N4Q0 377 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 MREGQ8N565 214 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ANKFN1Q8N957 763 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 OR1N2Q8NGR9 330 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 OR2T34Q8NGX1 318 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 OR2G2Q8NGZ5 317 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 UBE2E3Q969T4 207 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 AURKBQ96GD4 344 aaPredicted RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 C16orf45Q96MC5 204 aaPredicted RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 MS4A4EQ96PG1 132 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 SLC38A2Q96QD8 506 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ZNF607Q96SK3 696 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 FMO2Q99518 471 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 DOK1Q99704 481 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 RARRES2Q99969 163 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 OMDQ99983 421 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 RIOK2Q9BVS4 552 aaKnown RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 RAB34Q9BZG1 259 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 LRRN3Q9H3W5 708 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 ADAP2Q9NPF8 381 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 IL26Q9NPH9 171 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 POLE3Q9NRF9 147 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 GLRX2Q9NS18 164 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 GIN1Q9NXP7 522 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 MRPS18BQ9Y676 258 aaKnown RBP0.85□□□□□ -2.27
SRP54-207ENST00000555535 SORL1Q92673 2214 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 KIF16BQ96L93 1317 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 C2orf16Q68DN1 1984 aa0.85□□□□□ -2.27
SRP54-207ENST00000555535 CEMIPQ8WUJ3 1361 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 LOXHD1Q8IVV2 1947 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 IGKV1D-13A0A0B4J2D9 117 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 OR5B21A6NL26 309 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 HIDE1A8MVS5 230 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 F6UB75 175 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 LGALS9O00182 355 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 BTN3A3O00478 584 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 XKRYO14609 159 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 HSD17B6O14756 317 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ERLIN2O94905 339 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 GAPDHP04406 335 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 IGKV1-13P0DP09 117 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 HSPA5P11021 654 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 AK4P27144 223 aaPredicted RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 ATP5C1P36542 298 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 MAP3K8P41279 467 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 GYG1P46976 350 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 RORCP51449 518 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ATP1B3P54709 279 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 BPIFB3P59826 476 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 RPS21P63220 83 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 LOXL1Q08397 574 aaPredicted RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 FGL1Q08830 312 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ZNF616Q08AN1 781 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ELP6Q0PNE2 266 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 BAMBIQ13145 260 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 GINS1Q14691 196 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 RGNQ15493 299 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 DPYSL2Q16555 572 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TATDN3Q17R31 274 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TTLL9Q3SXZ7 439 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 COA6Q5JTJ3 125 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 PDZK1Q5T2W1 519 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TTC23Q5W5X9 447 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 OR4F3Q6IEY1 312 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 KDM7AQ6ZMT4 941 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 UTS2BQ765I0 119 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 STRADAQ7RTN6 431 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 PUSL1Q8N0Z8 303 aaKnown RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 SYT14Q8NB59 555 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 PYROXD1Q8WU10 500 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ACOT11Q8WXI4 607 aaPredicted RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 DTNBP1Q96EV8 351 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TCEANC2Q96MN5 208 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 RNF157Q96PX1 679 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 PANX2Q96RD6 677 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ECSITQ9BQ95 431 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TIMM29Q9BSF4 260 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 TUBGCP2Q9BSJ2 902 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 ZSCAN5AQ9BUG6 496 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 RAB33BQ9H082 229 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 PPA2Q9H2U2 334 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 YY1AP1Q9H869 796 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 UGT1A7Q9HAW7 530 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 UGT1A10Q9HAW8 530 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 UGT1A8Q9HAW9 530 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 SLC35D1Q9NTN3 355 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 PACSIN2Q9UNF0 486 aaPredicted RBP0.84□□□□□ -2.27
SRP54-207ENST00000555535 RASD1Q9Y272 281 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 POLDIP2Q9Y2S7 368 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 SIGLEC9Q9Y336 463 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 AP1M2Q9Y6Q5 423 aa0.84□□□□□ -2.27
SRP54-207ENST00000555535 CAMTA1Q9Y6Y1 1673 aa0.84□□□□□ -2.28
SRP54-207ENST00000555535 COL5A3P25940 1745 aaPredicted RBP0.84□□□□□ -2.28
SRP54-207ENST00000555535 TRIP11Q15643 1979 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 IGHV5-10-1A0A0J9YXX1 117 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 A0A1B0GVI7 797 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 A0A1B0GVL5 298 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 A0A1W2PNV4 684 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 TMEM223A0PJW6 202 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms