RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SLC7A13Q8TCU3 470 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 ACMSDQ8TDX5 336 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 GEMIN6Q8WXD5 167 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 MYDGFQ969H8 173 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 ASB8Q9H765 288 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
VRK1-205ENST00000555402 GCNT4Q9P109 453 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 GNPTGQ9UJJ9 305 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 KIAA1257Q9ULG3 409 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 CELA1Q9UNI1 258 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 HEBP2Q9Y5Z4 205 aa3.68□□□□□ -1.82
VRK1-205ENST00000555402 CNTNAP1P78357 1384 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 TRBV11-1A0A0K0K1C0 115 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 NCF1BA6NI72 391 aaPredicted RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 NCF1CA8MVU1 366 aaPredicted RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 TRIM49D1C9J1S8 452 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 H0YIV9 168 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 L7N2F9 121 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 WRBO00258 174 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 CDC7O00311 574 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 SLC31A2O15432 143 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 DNAJB6O75190 326 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 EEDO75530 441 aaKnown RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 IGHV4-34P06331 123 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 CALM1P0DP23 149 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 CALM2P0DP24 149 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 CALM3P0DP25 149 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 NUDT1P36639 197 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ACTA2P62736 377 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ACTG2P63267 376 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ACTC1P68032 377 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ACTA1P68133 377 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 IRX3P78415 501 aaPredicted RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 ZNF92Q03936 586 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 MERTKQ12866 999 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 AQP6Q13520 282 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 C9orf135Q5VTT2 229 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 FRMPD2BQ6IN97 320 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ANKRD26P1Q6NSI1 321 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ACP7Q6ZNF0 438 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 BZW1Q7L1Q6 419 aaKnown RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 TMEM135Q86UB9 458 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 PDIK1LQ8N165 341 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 OR52K1Q8NGK4 314 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 MCOLN3Q8TDD5 553 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ELSPBP1Q96BH3 223 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 NRTNQ99748 197 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 C11orf70Q9BRQ4 267 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 OSBPL10Q9BXB5 764 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 NXF3Q9H4D5 531 aaKnown RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 EXO5Q9H790 373 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
VRK1-205ENST00000555402 SLC25A37Q9NYZ2 338 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 DEC1Q9P2X7 70 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 RPS6KB2Q9UBS0 482 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 ZNF225Q9UK10 706 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 PSME2Q9UL46 239 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 VANGL2Q9ULK5 521 aa3.67□□□□□ -1.82
VRK1-205ENST00000555402 IGKV1D-13A0A0B4J2D9 117 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 TRAF3IP2O43734 574 aaPredicted RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 CACNG3O60359 315 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 NEMFO60524 1076 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 TSPAN13O95857 204 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 KRT6AP02538 564 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 IGKV1-13P0DP09 117 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 CNR1P21554 472 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 OTX1P32242 354 aaPredicted RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 CHRNA6Q15825 494 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 HSP90B2PQ58FF3 399 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 PPM1LQ5SGD2 360 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 C1orf185Q5T7R7 199 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 SLC16A14Q7RTX9 510 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 PEX26Q7Z412 305 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 HSD17B11Q8NBQ5 300 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 OR4A4PQ8NGN8 299 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 OR5B3Q8NH48 314 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 ZNF502Q8TBZ5 544 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 DTX3LQ8TDB6 740 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 TMEM54Q969K7 222 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 SLC35E1Q96K37 410 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 OR2M2Q96R28 347 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 OR51M1Q9H341 326 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 CWH43Q9H720 699 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 RPRD1BQ9NQG5 326 aaKnown RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 PTTG3PQ9NZH4 202 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 UXTQ9UBK9 157 aaPredicted RBP3.66□□□□□ -1.82
VRK1-205ENST00000555402 PCYOX1Q9UHG3 505 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 ING4Q9UNL4 249 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 MROH5Q6ZUA9 1318 aa3.66□□□□□ -1.82
VRK1-205ENST00000555402 A0A1B0GVI7 797 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 SERTM2A0A1B0GWG4 89 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 A6NDX4 124 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 F6UB75 175 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 M0QX08 132 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 XKRYO14609 159 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 EIF3HO15372 352 aaKnown RBP eCLIP3.65□□□□□ -1.83
VRK1-205ENST00000555402 PNMA6AP0CW24 399 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms