RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CCDC190Q86UF4 302 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 LYSMD2Q8IV50 215 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 PHC2Q8IXK0 858 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 GCNT2Q8N0V5 402 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 PARP16Q8N5Y8 322 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 C9orf106Q8NAJ2 232 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ELOA3Q8NG57 546 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 FNDC9Q8TBE3 224 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ROBO4Q8WZ75 1007 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 C3orf49Q96BT1 292 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 INTS12Q96CB8 462 aaKnown RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 RNFT2Q96EX2 444 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 COQ7Q99807 217 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 VKORC1Q9BQB6 163 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 TTYH2Q9BSA4 534 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 ASPNQ9BXN1 380 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 PLA2G12AQ9BZM1 189 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 TRIM2Q9C040 744 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 EGLN3Q9H6Z9 239 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 CLEC4AQ9UMR7 237 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 TRAPPC4Q9Y296 219 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 SPIN1Q9Y657 262 aaPredicted RBP8.82□□□□□ -1
PSEN1-213ENST00000555386 CDH10Q9Y6N8 788 aa8.82□□□□□ -1
PSEN1-213ENST00000555386 FREM1Q5H8C1 2179 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 IQCMA0A1B0GVH7 501 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 A1L4Q6 167 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SLC35F4A4IF30 521 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SLC22A20A6NK97 555 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 GJE1A6NN92 205 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SURF4O15260 269 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SYNGR4O95473 234 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 NTN1O95631 604 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 TGM6O95932 706 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 IL2RAP01589 272 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 KLK2P20151 261 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 HTR3AP46098 478 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 OR2B6P58173 313 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 DEFA1P59665 94 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 DEFA3P59666 94 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ADORA2A-AS1P86434 159 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ACSM1Q08AH1 577 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 BCL2A1Q16548 175 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 PGGHGQ32M88 737 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ALG10BQ5I7T1 473 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 PDSS1Q5T2R2 415 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ARMC4Q5T2S8 1044 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 AADACL4Q5VUY2 407 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 NXNL2Q5VZ03 156 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 TMEM211Q6ICI0 200 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ZNF620Q6ZNG0 422 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ESPNLQ6ZVH7 1005 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SEM1Q6ZVN7 128 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 MRGPRGQ86SM5 289 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SLC43A2Q8N370 569 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 OR2T33Q8NG76 320 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 OR8D4Q8NGM9 314 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ZPLD1Q8TCW7 415 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 RND1Q92730 232 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SLC35B4Q969S0 331 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 FAM46AQ96IP4 442 aaKnown RBP8.81□□□□□ -1
PSEN1-213ENST00000555386 ARL5BQ96KC2 179 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 WDFY2Q96P53 400 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 DMRTA2Q96SC8 542 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 NEURL2Q9BR09 285 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 MED18Q9BUE0 208 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 SRXN1Q9BYN0 137 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 ADAM19Q9H013 955 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 FN3KQ9H479 309 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 RNF167Q9H6Y7 350 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 TMEM5Q9Y2B1 443 aa8.81□□□□□ -1
PSEN1-213ENST00000555386 EXOGQ9Y2C4 368 aaKnown RBP8.81□□□□□ -1
PSEN1-213ENST00000555386 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 A0A0G2JNJ9 132 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 FAM90A27PA6NNH2 459 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 SULT2B1O00204 365 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 THY1P04216 161 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 TSPAN19P0C672 248 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 HTR1FP30939 366 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 PTGER4P35408 488 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 ETV1P50549 477 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 CDH11P55287 796 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 SIRPAP78324 504 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 RUNX1T1Q06455 604 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 MYBPHQ13203 477 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 SF3B4Q15427 424 aaKnown RBP eCLIP8.8□□□□□ -1
PSEN1-213ENST00000555386 NSUN5P2Q63ZY6 315 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 BCDIN3DQ7Z5W3 292 aaKnown RBP8.8□□□□□ -1
PSEN1-213ENST00000555386 ATG4DQ86TL0 474 aaPredicted RBP8.8□□□□□ -1
PSEN1-213ENST00000555386 GID4Q8IVV7 300 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 NKAIN4Q8IVV8 208 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 NRMQ8IXM6 262 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 C10orf53Q8N6V4 93 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 CNEP1R1Q8N9A8 125 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 UFD1Q92890 307 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
PSEN1-213ENST00000555386 SLC25A36Q96CQ1 311 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 DDIT4LQ96D03 193 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 CEP19Q96LK0 163 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 HS6ST2Q96MM7 605 aa8.8□□□□□ -1
PSEN1-213ENST00000555386 SLC30A2Q9BRI3 323 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms