RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TSPAN14Q8NG11 270 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 OR6K6Q8NGW6 343 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 RNFT2Q96EX2 444 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 KCNK17Q96T54 332 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NDEL1Q9GZM8 345 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 DUSP21Q9H596 190 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 FKBP14Q9NWM8 211 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 FLVCR1Q9Y5Y0 555 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 COMMD3-BMI1R4GMX3 469 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SLC22A23A1A5C7 686 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SLC22A20A6NK97 555 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 DNPH1O43598 174 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 MT-ND2P03891 347 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PGA4P0DJD7 388 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PGA3P0DJD8 388 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PSKH1P11801 424 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 ABOP16442 354 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PAICSP22234 425 aaKnown RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 RPS27P42677 84 aaKnown RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 MAP2K4P45985 399 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 RPS3AP61247 264 aaKnown RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 TEKQ02763 1124 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 RASGEF1BQ0VAM2 473 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 ST3GAL4Q11206 333 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PDSS1Q5T2R2 415 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 MEDAGQ5VYS4 303 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 MEPCEQ7L2J0 689 aaKnown RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 OR51G2Q8NGK0 314 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 LGALS12Q96DT0 336 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 Q96MT0 163 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 COPS4Q9BT78 406 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 TIGARQ9NQ88 270 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PLCXD1Q9NUJ7 323 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 LOC102725191A0A1B0GVB3 256 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SH3D21A4FU49 640 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 OR14I1A6ND48 311 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SLC16A7O60669 478 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SYNGR4O95473 234 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 IGHV3-9P01782 118 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 EDN3P14138 238 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 HTR1FP30939 366 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 NAA10P41227 235 aaPredicted RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 MTNR1AP48039 350 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 HCCSP53701 268 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 POU4F3Q15319 338 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 LINC01590Q5TEZ4 76 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 LINGO2Q7L985 606 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 ADCK1Q86TW2 530 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 OR52I1Q8NGK6 324 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 OR2M2Q96R28 347 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SIGLEC11Q96RL6 698 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 TEAD3Q99594 435 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 MRPL13Q9BYD1 178 aaKnown RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 TTTY10Q9BZA0 68 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 CALHM2Q9HA72 323 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 SCN3BQ9NY72 215 aa9.54□□□□□ -0.88
TDP1-211ENST00000555178 VSX1Q9NZR4 365 aaPredicted RBP9.54□□□□□ -0.88
TDP1-211ENST00000555178 TVP23AA6NH52 213 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 NPIPB13A6NJU9 1138 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 NPIPB4C9JG80 1138 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 SELENOFO60613 162 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 ZNF432O94892 652 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 VAMP5O95183 116 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 MPZL1O95297 269 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 FADS2O95864 444 aaKnown RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 RENP00797 406 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 CHMP1BQ7LBR1 199 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 GID4Q8IVV7 300 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 TMEM123Q8N131 208 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 ZNF843Q8N446 348 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 NOXO1Q8NFA2 376 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 NSMAFQ92636 917 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 INTS12Q96CB8 462 aaKnown RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 SLC25A44Q96H78 314 aaPredicted RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 TBX5Q99593 518 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 PRRG4Q9BZD6 226 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 RNF122Q9H9V4 155 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 H2AFY2Q9P0M6 372 aaPredicted RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 CLEC2DQ9UHP7 191 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 BLOC1S6Q9UL45 172 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 MCTS1Q9ULC4 181 aaKnown RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-211ENST00000555178 TPRKBQ9Y3C4 175 aa9.53□□□□□ -0.88
TDP1-211ENST00000555178 RPL36Q9Y3U8 105 aaKnown RBP9.53□□□□□ -0.88
TDP1-211ENST00000555178 IGLV1-36A0A0B4J1U3 117 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 CDK1P06493 297 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 CD79BP40259 229 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 CLRN1P58418 232 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 SIRPAP78324 504 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 TLE1Q04724 770 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 MEP1BQ16820 701 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 VWA1Q6PCB0 445 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms