RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 GPR171O14626 319 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 MRPL33O75394 65 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 LY6HO94772 140 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TNFAIP8O95379 198 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 PRKACGP22612 351 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TACR3P29371 465 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 IFNGR2P38484 337 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 YAP1P46937 504 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 CHN2P52757 468 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TAS2R41P59536 307 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ESRRGP62508 458 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 PIN1Q13526 163 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TMEM249Q2WGJ8 235 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ELOA3BQ3SY89 546 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ENTPD8Q5MY95 495 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 UGT2A3Q6UWM9 527 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 MUC15Q8N387 334 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 LSMEM1Q8N8F7 131 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ZIC4Q8N9L1 334 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 SETD9Q8NE22 299 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ELOA3Q8NG57 546 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 SLC7A13Q8TCU3 470 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 CYGBQ8WWM9 190 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 RADILQ96JH8 1075 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 ADAD1Q96M93 576 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 FEVQ99581 238 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 PITX2Q99697 317 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 WFDC6Q9BQY6 131 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 RHNO1Q9BSD3 238 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 SLC17A5Q9NRA2 495 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 PAPOLBQ9NRJ5 636 aaKnown RBP9.24□□□□□ -0.93
SHMT2-215ENST00000554656 MAN2C1Q9NTJ4 1040 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TRAPPC4Q9Y296 219 aa9.24□□□□□ -0.93
SHMT2-215ENST00000554656 TRBV4-1A0A0J9YWV2 114 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 LOC100130705A0A1B0GUX0 176 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 HTR3EA5X5Y0 456 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 RNF212BA8MTL3 300 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ATP6V1G2-DDX39BF2Z307 99 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ZNF208O43345 1280 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 TPST2O60704 377 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 LYNP07948 512 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 RPSAP08865 295 aaKnown RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 GSTM3P21266 225 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 FABP6P51161 128 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 P2RY4P51582 365 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 POLR2HP52434 150 aaKnown RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 UGT2B15P54855 530 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 SLC35A1P78382 337 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 LGALS3BPQ08380 585 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 LOXL1Q08397 574 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 NPRL3Q12980 569 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 FGD3Q5JSP0 725 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 C1orf94Q6P1W5 598 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 PAQR6Q6TCH4 344 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 CLEC2AQ6UVW9 174 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 C8orf59Q8N0T1 100 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 FBXL14Q8N1E6 418 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 TMEM99Q8N816 258 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 C1orf162Q8NEQ5 155 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 OR52J3Q8NH60 311 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ADAMTS16Q8TE57 1224 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ACOT11Q8WXI4 607 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 SLC41A3Q96GZ6 507 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 MPP4Q96JB8 637 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 CNBD2Q96M20 576 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ZNF385AQ96PM9 386 aaKnown RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 TNFRSF13CQ96RJ3 184 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 MBOAT4Q96T53 435 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ADAM19Q9H013 955 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 ZNF696Q9H7X3 374 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 TMEM27Q9HBJ8 222 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 KRCC1Q9NPI7 259 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-215ENST00000554656 BATF3Q9NR55 127 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 RLIMQ9NVW2 624 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 UBAP1Q9NZ09 502 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 POU2F3Q9UKI9 436 aa9.23□□□□□ -0.93
SHMT2-215ENST00000554656 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 CHP2O43745 196 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 OR10H3O60404 316 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 AKR7A3O95154 331 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 GKN3PP0CG01 181 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 FKBP2P26885 142 aaKnown RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 RBM34P42696 430 aaKnown RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 ACAA2P42765 397 aaKnown RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 SLC1A3P43003 542 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 HTR3AP46098 478 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 TEKQ02763 1124 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 LAPTM4AQ15012 233 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 OR1Q1Q15612 314 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 MST1LQ2TV78 715 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 ZIK1Q3SY52 487 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 HIKESHIQ53FT3 197 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 OR7E24Q6IFN5 339 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 ZNF544Q6NX49 715 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms