RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MRI1Q9BV20 369 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 ULBP2Q9BZM5 246 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 MS4A7Q9GZW8 240 aaPredicted RBP7.6□□□□□ -1.19
PRKCH-208ENST00000553846 OR51B6Q9H340 312 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 C12orf10Q9HB07 376 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 SLC6A13Q9NSD5 602 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 NOP53Q9NZM5 478 aaKnown RBP7.6□□□□□ -1.19
PRKCH-208ENST00000553846 TBK1Q9UHD2 729 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 NPTNQ9Y639 398 aa7.6□□□□□ -1.19
PRKCH-208ENST00000553846 ISPDA4D126 451 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 C5orf63A6NC05 138 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 C3orf80F5H4A9 247 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 ICMTO60725 284 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 BGLAPP02818 100 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 MT-ND5P03915 603 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 HTR2AP28223 471 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 ALDH3A1P30838 453 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 CDKN2CP42773 168 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 TXNL4AP83876 142 aaKnown RBP7.59□□□□□ -1.19
PRKCH-208ENST00000553846 HOXC5Q00444 222 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 SLC3A1Q07837 685 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 CAMK2DQ13557 499 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 SMU1Q2TAY7 513 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 MBNL2Q5VZF2 373 aaKnown RBP7.59□□□□□ -1.19
PRKCH-208ENST00000553846 FAM205BPQ63HN1 556 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 LRFN4Q6PJG9 635 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 TRMT10CQ7L0Y3 403 aaKnown RBP7.59□□□□□ -1.19
PRKCH-208ENST00000553846 UEVLDQ8IX04 471 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 PEX5LQ8IYB4 626 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 SCAIQ8N9R8 606 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 OR6S1Q8NH40 331 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 OR52P1PQ8NH57 321 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 AGR3Q8TD06 166 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 C10orf82Q8WW14 230 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 C11orf40Q8WZ69 217 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 SLC35B4Q969S0 331 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 TEX37Q96LM6 180 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 MOGAT1Q96PD6 335 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 SPATA9Q9BWV2 254 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 BCL2L14Q9BZR8 327 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 DPY30Q9C005 99 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 MARCH7Q9H992 704 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 DECR2Q9NUI1 292 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 MKS1Q9NXB0 559 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 EGFL7Q9UHF1 273 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 IL20RAQ9UHF4 553 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 BTNL2Q9UIR0 455 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 POFUT2Q9Y2G5 429 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 RNF114Q9Y508 228 aa7.59□□□□□ -1.19
PRKCH-208ENST00000553846 TET2Q6N021 2002 aaPredicted RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 TRAV36DV7A0A075B6V5 113 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 IGHV2-70DA0A0C4DH43 119 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SPRY3O43610 288 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 OR2T1O43869 369 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 CPSF4O95639 269 aaKnown RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 LCKP06239 509 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 MELTFP08582 738 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 THRBP10828 461 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 LSP1P33241 339 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 CHI3L1P36222 383 aaPredicted RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SELENOVP59797 346 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 COPZ1P61923 177 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 ANXA8L1Q5VT79 327 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 C5orf46Q6UWT4 87 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 BRD3OSQ6XYD6 125 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SYT10Q6XYQ8 523 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 RFPL4BQ6ZWI9 263 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 LRRC34Q8IZ02 419 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SPICQ8N5J4 248 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 LSMEM1Q8N8F7 131 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 CPEB3Q8NE35 698 aaKnown RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 OR10S1Q8NGN2 331 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 FAM110DQ8TAY7 271 aaPredicted RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SLC38A5Q8WUX1 472 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 IFT81Q8WYA0 676 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SLC38A4Q969I6 547 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 TUBGCP3Q96CW5 907 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 DIRC2Q96SL1 478 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SEPHS2Q99611 448 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 SH3GL3Q99963 347 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 C1orf198Q9H425 327 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 NOX4Q9NPH5 578 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 TMEM106BQ9NUM4 274 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 MRPL39Q9NYK5 338 aaKnown RBP7.58□□□□□ -1.2
PRKCH-208ENST00000553846 ASH2LQ9UBL3 628 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 STAB2Q8WWQ8 2551 aa7.58□□□□□ -1.2
PRKCH-208ENST00000553846 A0A1B0GWA3 101 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 CCDC154A6NI56 674 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 PLPP3O14495 311 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 OPN1MWP04001 364 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 SHBGP04278 402 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 WNT2P09544 360 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 SBK2P0C263 348 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 FAM153BP0C7A2 387 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 OPN1MW2P0DN77 364 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 OPN1MW3P0DN78 364 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms