RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 RSRC1Q96IZ7 334 aaKnown RBP11.57□□□□□ -0.56
CDX2-202ENST00000548877 TEX37Q96LM6 180 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 OXGR1Q96P68 337 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 ZMAT3Q9HA38 289 aaKnown RBP11.57□□□□□ -0.56
CDX2-202ENST00000548877 OPN4Q9UHM6 478 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 ZNF346Q9UL40 294 aaKnown RBP11.57□□□□□ -0.56
CDX2-202ENST00000548877 FXYD1O00168 92 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 GMNNO75496 209 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 PRSS23O95084 383 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 HOXB6P17509 224 aaKnown RBP11.56□□□□□ -0.56
CDX2-202ENST00000548877 SLC6A2P23975 617 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 FPR2P25090 351 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 VHLP40337 213 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 GSG1Q2KHT4 349 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 ZNF311Q5JNZ3 666 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 DHFR2Q86XF0 187 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 PIK3C3Q8NEB9 887 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 RNF217Q8TC41 542 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 OR2M2Q96R28 347 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 CGREF1Q99674 301 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 SYT3Q9BQG1 590 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 PTDSS2Q9BVG9 487 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 SLITRK2Q9H156 845 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 NKIRAS2Q9NYR9 191 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 MYEF2Q9P2K5 600 aaKnown RBP11.56□□□□□ -0.56
CDX2-202ENST00000548877 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
CDX2-202ENST00000548877 AQP12BA6NM10 295 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 ACOT8O14734 319 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 AHSA1O95433 338 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 CPSF4O95639 269 aaKnown RBP11.55□□□□□ -0.56
CDX2-202ENST00000548877 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 HLA-HP01893 362 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 C1QCP02747 245 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 GKN3PP0CG01 181 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 PRTN3P24158 256 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 CRYBB2P43320 205 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 ANXA11P50995 505 aaKnown RBP11.55□□□□□ -0.56
CDX2-202ENST00000548877 EGR4Q05215 589 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 MAD2L1BPQ15013 274 aaPredicted RBP11.55□□□□□ -0.56
CDX2-202ENST00000548877 MAPK11Q15759 364 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 MIDNQ504T8 468 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 C6orf10Q5SRN2 563 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 DCAF12L2Q5VW00 463 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 DOK3Q7L591 496 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 ANKRD46Q86W74 232 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 AQP12AQ8IXF9 295 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 SLC15A3Q8IY34 581 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 PEX5LQ8IYB4 626 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 KDM8Q8N371 416 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 BHLHE22Q8NFJ8 381 aaPredicted RBP11.55□□□□□ -0.56
CDX2-202ENST00000548877 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 LRR1Q96L50 414 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 CCDC115Q96NT0 180 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 KCTD14Q9BQ13 255 aaPredicted RBP11.55□□□□□ -0.56
CDX2-202ENST00000548877 SLC35A5Q9BS91 424 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 ACTR3BQ9P1U1 418 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 BTNL2Q9UIR0 455 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 NOX1Q9Y5S8 564 aa11.55□□□□□ -0.56
CDX2-202ENST00000548877 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 IGLV3-9A0A075B6K5 115 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIAL4EA0A075B759 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIAL4CA0A0B4J2A2 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PRORSD1PA6NEY8 169 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 C17orf100A8MU93 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIAL4DF5H284 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 NME4O00746 187 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 ANP32DO95626 131 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 BAG2O95816 211 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIAL4FP0DN26 164 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 NAT2P11245 290 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PPIBP23284 216 aaKnown RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 CHI3L1P36222 383 aaPredicted RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 COPZ1P61923 177 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 ZP4Q12836 540 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PCGF3Q3KNV8 242 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 MTX3Q5HYI7 312 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PAGE3Q5JUK9 113 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 SPANXN4Q5MJ08 99 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 PHYHD1Q5SRE7 291 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 RNF220Q5VTB9 566 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 NANOGP8Q6NSW7 305 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 SLC2A7Q6PXP3 512 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 DLEU7Q6UYE1 221 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 NHLRC1Q6VVB1 395 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 SPATA24Q86W54 205 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 RNF130Q86XS8 419 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 C20orf196Q8IYI0 205 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 GTF2H4Q92759 462 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 DUS3LQ96G46 650 aaKnown RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 ECSITQ9BQ95 431 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 UNKLQ9H9P5 680 aaKnown RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 NANOGQ9H9S0 305 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 ZNF224Q9NZL3 707 aa11.54□□□□□ -0.56
CDX2-202ENST00000548877 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
CDX2-202ENST00000548877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms