RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 WNT11O96014 354 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 POU3F4P49335 361 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 PSMD4P55036 377 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 EIF2B1Q14232 305 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 BEX5Q5H9J7 111 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 TSSK4Q6SA08 328 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 ALKAL2Q6UX46 152 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 C17orf107Q6ZR85 190 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF615Q8N8J6 731 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 CA10Q9NS85 328 aa12.38□□□□□ -0.43
PRPF40B-209ENST00000548825 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CENPBD1B2RD01 187 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 G3V3Y1 287 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 AIPO00170 330 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 PEX14O75381 377 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 RBBP9O75884 186 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SLC37A1P57057 533 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CBFBQ13951 182 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 INPP5JQ15735 1006 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF141Q15928 474 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 FAM198BQ6UWH4 519 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 C8orf33Q9H7E9 229 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SERTAD3Q9UJW9 196 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 RNF215Q9Y6U7 377 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 M0R233 179 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 NUPL2O15504 423 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 OGG1O15527 345 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CTLA4P16410 223 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SFTPDP35247 375 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 P2RX1P51575 399 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 HSD17B7P56937 341 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 TAS2R20P59543 309 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 POU3F1Q03052 451 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 WDR38Q5JTN6 314 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 OR1L3Q8NH93 324 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ARL5BQ96KC2 179 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 KLHL15Q96M94 604 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 GHITMQ9H3K2 345 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 EXO5Q9H790 373 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 FGF21Q9NSA1 209 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 RPH3AQ9Y2J0 694 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CFDP00746 253 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 HLA-DQB1P01920 261 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 PNMTP11086 282 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SKP2Q13309 424 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 GRK1Q15835 563 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 KLHL26Q53HC5 615 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 FAM199XQ6PEV8 388 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ATG4DQ86TL0 474 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF248Q8NDW4 579 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 OR7G1Q8NGA0 311 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 JSRP1Q96MG2 331 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF304Q9HCX3 659 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 KLRF1Q9NZS2 232 aa12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 CNOT1A5YKK6 2376 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF823P16415 610 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 MMP15P51511 669 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 TOMM20Q15388 145 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 TCTE1Q5JU00 501 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 GLYATL3Q5SZD4 288 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SLC22A10Q63ZE4 541 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 FAM219AQ8IW50 185 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SYS1Q8N2H4 156 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ADAMTS18Q8TE60 1221 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 NPRL2Q8WTW4 380 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ADAMTS14Q8WXS8 1223 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PTDSS2Q9BVG9 487 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PYCARD-AS1I3L0S3 204 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 LMX1BO60663 402 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 AHSA1O95433 338 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 MANEAQ5SRI9 462 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 RFPL4BQ6ZWI9 263 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 SLC16A9Q7RTY1 509 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ZC3HAV1LQ96H79 300 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 RDH8Q9NYR8 311 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
PRPF40B-209ENST00000548825 CLDN16Q9Y5I7 305 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms