RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PPP1R8Q12972 351 aaKnown RBP12.67□□□□□ -0.38
DDX54-203ENST00000546869 C3orf36Q3SXR2 165 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 NCMAPQ5T1S8 102 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 THSD4Q6ZMP0 1018 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 WFDC8Q8IUA0 241 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 OR10G2Q8NGC3 310 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 OR9Q2Q8NGE9 314 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 RAB3IPQ96QF0 476 aaPredicted RBP12.67□□□□□ -0.38
DDX54-203ENST00000546869 FOXB1Q99853 325 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 TMEM204Q9BSN7 226 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 CLEC4MQ9H2X3 399 aaPredicted RBP12.67□□□□□ -0.38
DDX54-203ENST00000546869 DENND2DQ9H6A0 471 aaPredicted RBP12.67□□□□□ -0.38
DDX54-203ENST00000546869 ESRP2Q9H6T0 727 aaKnown RBP12.67□□□□□ -0.38
DDX54-203ENST00000546869 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 POFUT2Q9Y2G5 429 aa12.67□□□□□ -0.38
DDX54-203ENST00000546869 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.66□□□□□ -0.38
DDX54-203ENST00000546869 FCGR1AP12314 374 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 ANXA8P13928 327 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 CDH2P19022 906 aaPredicted RBP12.66□□□□□ -0.38
DDX54-203ENST00000546869 FASP25445 335 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 ATP6AP1Q15904 470 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 HIKESHIQ53FT3 197 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 SLC25A47Q6Q0C1 308 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 KLHL17Q6TDP4 642 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 DPPA2Q7Z7J5 298 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 TMEM179BQ7Z7N9 219 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 ADCK1Q86TW2 530 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 IGFN1Q86VF2 1251 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 AQP11Q8NBQ7 271 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 OR52N5Q8NH56 324 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 FANK1Q8TC84 345 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 FEVQ99581 238 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 BDH2Q9BUT1 245 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 CRNNQ9UBG3 495 aaPredicted RBP12.66□□□□□ -0.38
DDX54-203ENST00000546869 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
DDX54-203ENST00000546869 DPRXA6NFQ7 191 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 XKRYO14609 159 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 TIPRLO75663 272 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 PTAFRP25105 342 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 ZNF84P51523 738 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 IST1P53990 364 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 UBE2NP61088 152 aaKnown RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 MESTQ5EB52 335 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 ADAM5Q6NVV9 412 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 KLHL24Q6TFL4 600 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 TMEM108Q6UXF1 575 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 TMEM200AQ86VY9 491 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 SYT14Q8NB59 555 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 DNAJC9Q8WXX5 260 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 PLPPR2Q96GM1 343 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 RADILQ96JH8 1075 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 SAMD8Q96LT4 415 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 Q96M85 177 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 ZNF570Q96NI8 536 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 PLEKHF2Q9H8W4 249 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 PDP1Q9P0J1 537 aaPredicted RBP12.65□□□□□ -0.38
DDX54-203ENST00000546869 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.38
DDX54-203ENST00000546869 A0A096LPE4 126 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 A0A1W2PPZ6 126 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 E2F6O75461 281 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 IGKV3-15P01624 115 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
DDX54-203ENST00000546869 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 CBR1P16152 277 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 NPR2P20594 1047 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 ARR3P36575 388 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 ERFP50548 548 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 KRTAP10-9P60411 292 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 KPNB1Q14974 876 aaKnown RBP12.64□□□□□ -0.39
DDX54-203ENST00000546869 ZFP1Q6P2D0 407 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 ZNF813Q6ZN06 617 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 FOXL2NBQ6ZUU3 175 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 HIPK1Q86Z02 1210 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 OR52L1Q8NGH7 329 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 OR5K1Q8NHB7 308 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
DDX54-203ENST00000546869 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 REV1Q9UBZ9 1251 aa12.64□□□□□ -0.39
DDX54-203ENST00000546869 IL20RAQ9UHF4 553 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms