RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CEACAM5P06731 702 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FBXO45P0C2W1 286 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 AKR1C2P52895 323 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 SLC25A1P53007 311 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 AKR1C1Q04828 323 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FAM53BQ14153 422 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 GUCA2BQ16661 112 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 C2orf76Q3KRA6 126 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 ARHGAP40Q5TG30 622 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 RAB12Q6IQ22 244 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 CBLN2Q8IUK8 224 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 SHISA5Q8N114 240 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 ASB12Q8WXK4 309 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 VWCEQ96DN2 955 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TM4SF19Q96DZ7 209 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 HHIPL1Q96JK4 782 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.34
SRP54-202ENST00000546080 GAREM1Q9H706 876 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 COA4Q9NYJ1 87 aa12.9□□□□□ -0.34
SRP54-202ENST00000546080 TICRRQ7Z2Z1 1910 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 OR5K4A6NMS3 321 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
SRP54-202ENST00000546080 BLOC1S5-TXNDC5H3BN57 136 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 CCSO14618 274 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 ITGA5P08648 1049 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 SRSF4Q08170 494 aaKnown RBP12.89□□□□□ -0.35
SRP54-202ENST00000546080 MGAT2Q10469 447 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 DHRS2Q13268 280 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 MANEAQ5SRI9 462 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 AGBL4Q5VU57 503 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 CDC20BQ86Y33 519 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 SEC22AQ96IW7 307 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 OR2A5Q96R48 311 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
SRP54-202ENST00000546080 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
SRP54-202ENST00000546080 SLC17A5Q9NRA2 495 aa12.89□□□□□ -0.35
SRP54-202ENST00000546080 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
SRP54-202ENST00000546080 TBC1D3IA0A087WXS9 549 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PRR19A6NJB7 356 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 OR2AT4A6NND4 320 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 SULT1C2O00338 296 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 ADCYAP1P18509 176 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 CFPP27918 469 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 AQP2P41181 271 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PRMT2P55345 433 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 RASGEF1BQ0VAM2 473 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 SERTAD2Q14140 314 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 NR0B2Q15466 257 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 PRAMEF17Q5VTA0 474 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 GALNT16Q8N428 558 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 TINAGL1Q9GZM7 467 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 SRA1Q9HD15 236 aaKnown RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 ELOA3DA6NLF2 546 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 SLC17A2O00624 439 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 CTSVO60911 334 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 APOC1P02654 83 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 RFC3P40938 356 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 CASRP41180 1078 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 GRK6P43250 576 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ATP1B3P54709 279 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 TCEA2Q15560 299 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 MICBQ29980 383 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ELOA3BQ3SY89 546 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 VWA2Q5GFL6 755 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ZNF627Q7L945 461 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PRSS41Q7RTY9 318 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ELOA3Q8NG57 546 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 OR1J4Q8NGS1 313 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 MCHR2Q969V1 340 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ZBTB8AQ96BR9 441 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 PTDSS2Q9BVG9 487 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 CTSFQ9UBX1 484 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
SRP54-202ENST00000546080 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
SRP54-202ENST00000546080 OTOL1A6NHN0 477 aaPredicted RBP12.87□□□□□ -0.35
SRP54-202ENST00000546080 TMEM200CA6NKL6 621 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 CYB5AP00167 134 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms