RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TPK1Q9H3S4 243 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 ARMCX1Q9P291 453 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 MYEF2Q9P2K5 600 aaKnown RBP18.19■□□□□ 0.5
SCARB1-210ENST00000545493 CAPN7Q9Y6W3 813 aa18.19■□□□□ 0.5
SCARB1-210ENST00000545493 LOC100653049A0A140TA62 436 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 SH3PXD2BA1X283 911 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 BLOC1S5-TXNDC5H3BN57 136 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 PIP5K1CO60331 668 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 KRT34O76011 436 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 BCL10O95999 233 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 IGF2P01344 180 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 F13BP05160 661 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 VIMP08670 466 aaKnown RBP18.18■□□□□ 0.5
SCARB1-210ENST00000545493 ADRA2AP08913 450 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 QDPRP09417 244 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 TSPAN19P0C672 248 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 FAM157CP0CG43 387 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 APEHP13798 732 aaKnown RBP18.18■□□□□ 0.5
SCARB1-210ENST00000545493 ZNF23P17027 643 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 GLRXP35754 106 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 GUCY1A3Q02108 690 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 HIST3H3Q16695 136 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 PODNL1Q6PEZ8 512 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 ARIH2OSQ8N7S6 290 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 OR2T12Q8NG77 320 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 RCN3Q96D15 328 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 SGTBQ96EQ0 304 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 SH3GL3Q99963 347 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 MRPL13Q9BYD1 178 aaKnown RBP18.18■□□□□ 0.5
SCARB1-210ENST00000545493 CCDC134Q9H6E4 229 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 RIMS3Q9UJD0 308 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 FBXL3Q9UKT7 428 aa18.18■□□□□ 0.5
SCARB1-210ENST00000545493 VSTM5A8MXK1 200 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 HIST1H2ABP04908 130 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 FUT1P19526 365 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 FUT4P22083 530 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 GIFP27352 417 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 AQP2P41181 271 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 CLRN1P58418 232 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 MYBPC1Q00872 1141 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 HIST3H2AQ7L7L0 130 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 LRP11Q86VZ4 500 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 PAQR4Q8N4S7 273 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-210ENST00000545493 POU5F2Q8N7G0 328 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 PCYOX1LQ8NBM8 494 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 OR4K5Q8NGD3 323 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 MOSPD2Q8NHP6 518 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 HIST1H2ACQ93077 130 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 MCHR2Q969V1 340 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 SYT3Q9BQG1 590 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 CHODLQ9H9P2 273 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 SLC7A8Q9UHI5 535 aa18.17■□□□□ 0.5
SCARB1-210ENST00000545493 LRP5LA4QPB2 252 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 MCIDASD6RGH6 385 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 M0R233 179 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 LMX1BO60663 402 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 SERPINA5P05154 406 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 ERCC1P07992 297 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-210ENST00000545493 OR8G3PP0DMU2 310 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 IL2RGP31785 369 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 KDELR2P33947 212 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 EVX1P49640 407 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 RPS23P62266 143 aaKnown RBP18.16■□□□□ 0.5
SCARB1-210ENST00000545493 GALK2Q01415 458 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 IQCCQ4KMZ1 466 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 FAM166AQ6J272 317 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 MICU2Q8IYU8 434 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 LIPHQ8WWY8 451 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 PRRC1Q96M27 445 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 GID8Q9NWU2 228 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 CMTM6Q9NX76 183 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 LPAR3Q9UBY5 353 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 KCNS2Q9ULS6 477 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 FZR1Q9UM11 496 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 A4GNTQ9UNA3 340 aa18.16■□□□□ 0.5
SCARB1-210ENST00000545493 A0A1W2PRG6 482 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 CENPBD1B2RD01 187 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 LYNX1G3V0Z9 82 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 SYNGR3O43761 229 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 TRMUO75648 421 aaKnown RBP18.15■□□□□ 0.5
SCARB1-210ENST00000545493 SLC2A10O95528 541 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 IFNA2P01563 188 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 IFNA14P01570 189 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 LYNX1P0DP58 116 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 THRBP10828 461 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 ALDH3B1P43353 468 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 DAP3P51398 398 aaKnown RBP18.15■□□□□ 0.5
SCARB1-210ENST00000545493 ZNF133P52736 654 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-210ENST00000545493 RIN1Q13671 783 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 MAD2L1BPQ15013 274 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-210ENST00000545493 NRN1LQ496H8 165 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 C10orf128Q5T292 105 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 ARMC4Q5T2S8 1044 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 GKAP1Q5VSY0 366 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-210ENST00000545493 IL17RELQ6ZVW7 336 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 ZNF786Q8N393 782 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 SYT14Q8NB59 555 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 ZNF540Q8NDQ6 660 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 SLC30A7Q8NEW0 376 aa18.15■□□□□ 0.5
SCARB1-210ENST00000545493 NMD3Q96D46 503 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms