RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TOMM34Q15785 309 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-223ENST00000544669 RAB11BQ15907 218 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 C14orf28Q4W4Y0 310 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 TMEM31Q5JXX7 168 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 DEGS2Q6QHC5 323 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 CBLN3Q6UW01 205 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 ESPNLQ6ZVH7 1005 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 GATSQ8NAP1 163 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF721Q8TF20 911 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 TSEN15Q8WW01 171 aaKnown RBP11.81□□□□□ -0.52
CPSF7-223ENST00000544669 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-223ENST00000544669 PTX4Q96A99 478 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 ARSGQ96EG1 525 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 OR2A7Q96R45 310 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 OR10A4Q9H209 315 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 METTL17Q9H7H0 456 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-223ENST00000544669 ANKRD10Q9NXR5 420 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 B9D1Q9UPM9 204 aa11.81□□□□□ -0.52
CPSF7-223ENST00000544669 GGT3PA6NGU5 568 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 HMSDA8MTL9 139 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 SLC17A2O00624 439 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 NUDT21O43809 227 aaKnown RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 TSPAN2O60636 221 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 AHSA1O95433 338 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 HLA-DQA2P01906 255 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 CTSBP07858 339 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 AKAIN1P0CW23 69 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 PRSS3P35030 304 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 VEGFCP49767 419 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 RIDAP52758 137 aaKnown RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 SUMO3P55854 103 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 TFF2Q03403 129 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF117Q03924 483 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 GLO1Q04760 184 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 TDGQ13569 410 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 LGALSLQ3ZCW2 172 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 SLC25A25Q6KCM7 469 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 NLRC3Q7RTR2 1065 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 IZUMO1Q8IYV9 350 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 ELMOD2Q8IZ81 293 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 FRMD1Q8N878 549 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 OR6N1Q8NGY5 312 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 GSX2Q9BZM3 304 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 TSPAN10Q9H1Z9 355 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-223ENST00000544669 SYT4Q9H2B2 425 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF304Q9HCX3 659 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 MGAT4CQ9UBM8 478 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 KIF25Q9UIL4 384 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 DHDHQ9UQ10 334 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 FANCMQ8IYD8 2048 aa11.8□□□□□ -0.52
CPSF7-223ENST00000544669 IGHV5-51A0A0C4DH38 117 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 A0A1B0GW55 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 FAM171A2A8MVW0 826 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 GMDSO60547 372 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SCGNO76038 276 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 CRYZL1O95825 349 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 NUDT14O95848 222 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DDAH2O95865 285 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 FSTP19883 344 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 FBLP22087 321 aaKnown RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 GRPRP30550 384 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SOX2P48431 317 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 TSPAN5P62079 268 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 EBPQ15125 230 aaKnown RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SFTPA2Q8IWL1 248 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 FTMTQ8N4E7 242 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SLC25A21Q9BQT8 299 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 POTEKPQ9BYX7 375 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ELOVL3Q9HB03 270 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 NUP50Q9UKX7 468 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 IDSB3KWA1 339 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ICOSLGO75144 302 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 AKR7A3O95154 331 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 HPXP02790 462 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 MAS1P04201 325 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ADRA2CP18825 462 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 NFYAP23511 347 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SLC26A5P58743 744 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 ZP4Q12836 540 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 PCGF3Q3KNV8 242 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 GXYLT1Q4G148 440 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 SHISA5Q8N114 240 aa11.79□□□□□ -0.52
CPSF7-223ENST00000544669 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms