RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 TEKQ02763 1124 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 TSTQ16762 297 aaKnown RBP15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 TMEM255AQ5JRV8 349 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 LRFN4Q6PJG9 635 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 DHRS4L2Q6PKH6 230 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 MSANTD1Q6ZTZ1 278 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 ZNF771Q7L3S4 317 aaPredicted RBP15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 C10orf111Q8N326 155 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 OR9I1Q8NGQ6 314 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 DUX5Q96PT3 197 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 EPYCQ99645 322 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 PAIP1Q9H074 479 aaKnown RBP15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 RMND5AQ9H871 391 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 GLTPQ9NZD2 209 aa15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 TESQ9UGI8 421 aaKnown RBP15.12■□□□□ 0.01
CLSTN3-214ENST00000542663 C11orf98E9PRG8 122 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 CLIC1O00299 241 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 HDAC3O15379 428 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 MAKP20794 623 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 PRTN3P24158 256 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 UCP2P55851 309 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 GLO1Q04760 184 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 FADDQ13158 208 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 OR1Q1Q15612 314 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 HFEQ30201 348 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 C6orf10Q5SRN2 563 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 OR5J2Q8NH18 312 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 OR6X1Q8NH79 312 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 NFKBIDQ8NI38 313 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 AENQ8WTP8 325 aaKnown RBP15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 C11orf40Q8WZ69 217 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 GTF2H4Q92759 462 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 RAB1CQ92928 201 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 TMEM43Q9BTV4 400 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 SAP30LQ9HAJ7 183 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 CDH20Q9HBT6 801 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 SDR39U1Q9NRG7 319 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 DECR2Q9NUI1 292 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 ZIM2Q9NZV7 527 aa15.11■□□□□ 0.01
CLSTN3-214ENST00000542663 DOCK11Q5JSL3 2073 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 DNAJC9-AS1A6NH13 148 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 C5orf58C9J3I9 102 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 TPD52L2O43399 206 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 MFN2O95140 757 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 IGHV3-13P01766 116 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 ADORA3P0DMS8 318 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 ZFP36P26651 326 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 POLR2JP52435 117 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 CDH12P55289 794 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 SLC35D2Q76EJ3 337 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 DOK3Q7L591 496 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 DEFB108BQ8NET1 73 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 TIMD4Q96H15 378 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 MAELQ96JY0 434 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 GAL3ST1Q99999 423 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 BCL2L14Q9BZR8 327 aa15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 UNKLQ9H9P5 680 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-214ENST00000542663 TRPC5OSA6NMA1 111 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 DHHO43323 396 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 IGHV1-46P01743 117 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 PGA4P0DJD7 388 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 PGA3P0DJD8 388 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 HNRNPA0Q13151 305 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 TBC1D28Q2M2D7 210 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 KRT71Q3SY84 523 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 NXNQ6DKJ4 435 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 TMEM53Q6P2H8 277 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 SLC2A7Q6PXP3 512 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 LINC00114Q6XXX2 140 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 RETREG3Q86VR2 466 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 BCL6BQ8N143 479 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 C10orf53Q8N6V4 93 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 LRRC17Q8N6Y2 441 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 ICA1LQ8NDH6 482 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 OR4K5Q8NGD3 323 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 ZNF48Q96MX3 618 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 C1orf198Q9H425 327 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 RAD21L1Q9H4I0 556 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 RNF121Q9H920 327 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 TMEM27Q9HBJ8 222 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 TAS2R5Q9NYW4 299 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 ZNF69Q9UC07 566 aa15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 LEF1Q9UJU2 399 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-214ENST00000542663 PPIAL4EA0A075B759 164 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 PPIAL4CA0A0B4J2A2 164 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 PPIAL4DF5H284 164 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 UBOX5O94941 541 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 MT-ATP6P00846 226 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 PPIAL4FP0DN26 164 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 KITP10721 976 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 ZNF81P51508 661 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 MMP15P51511 669 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 RGS8P57771 180 aaPredicted RBP15.08■□□□□ 0
CLSTN3-214ENST00000542663 NCALDP61601 193 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 MELKQ14680 651 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 SPRNQ5BIV9 151 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 KLF17Q5JT82 389 aaPredicted RBP15.08■□□□□ 0
CLSTN3-214ENST00000542663 FAM209AQ5JX71 171 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 RBMS3Q6XE24 437 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms