RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 LIPNQ5VXI9 398 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 ZNF626Q68DY1 528 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 TMPRSS12Q86WS5 348 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 DND1Q8IYX4 353 aaKnown RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 SLC25A45Q8N413 288 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 CADM4Q8NFZ8 388 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 OR5AK2Q8NH90 309 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 MIB2Q96AX9 1013 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 C3orf49Q96BT1 292 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 ADAD1Q96M93 576 aaKnown RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 ZNF285Q96NJ3 590 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 MRM2Q9UI43 246 aaKnown RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 FBXL3Q9UKT7 428 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 TMEM131Q92545 1883 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 PYCARD-AS1I3L0S3 204 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 UPK3AO75631 287 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 PPM1BO75688 479 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 NDUFB6O95139 128 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 ACSM4P0C7M7 580 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 CALCBP10092 127 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 ITPKBP27987 946 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 CSF2RBP32927 897 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 SLC37A1P57057 533 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 RPS4XP62701 263 aaKnown RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 HSD11B2P80365 405 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 OC90Q02509 493 aaPredicted RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 NSDHLQ15738 373 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 Q499Y3 187 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 FAM198BQ6UWH4 519 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 GPAT4Q86UL3 456 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 ZSCAN1Q8NBB4 408 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 FAM174AQ8TBP5 190 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 OR1F2PQ96R84 312 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 RTN4RQ9BZR6 473 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 SLITRK2Q9H156 845 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 SRA1Q9HD15 236 aaKnown RBP11.34□□□□□ -0.59
RNF4-222ENST00000541204 PRODH2Q9UF12 536 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 MPDZO75970 2070 aa11.34□□□□□ -0.59
RNF4-222ENST00000541204 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.59
RNF4-222ENST00000541204 H0YIG0 161 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 SIX6O95475 246 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 RPS27P42677 84 aaKnown RBP11.33□□□□□ -0.59
RNF4-222ENST00000541204 DHODHQ02127 395 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 HDDC2Q7Z4H3 204 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 FAM220AQ7Z4H9 259 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 JAZF1Q86VZ6 243 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 C17orf82Q86X59 251 aaPredicted RBP11.33□□□□□ -0.59
RNF4-222ENST00000541204 ELOA3Q8NG57 546 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 OR8K3Q8NH51 312 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 HLA-CQ95604 372 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 WBP1Q96G27 269 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 DPYSL5Q9BPU6 564 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 MESP1Q9BRJ9 268 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 NUDT22Q9BRQ3 303 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.59
RNF4-222ENST00000541204 FSCN3Q9NQT6 498 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.59
RNF4-222ENST00000541204 RP1P56715 2156 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 ALPK2Q86TB3 2170 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 TRAV8-7A0A075B6U6 113 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 A0A1B0GTQ1 180 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 hCG_1807616A0A1W2PRN6 198 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 OR2M5A3KFT3 312 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 TVP23AA6NH52 213 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 POM121CA8CG34 1229 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 H0YC42 278 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 H7C1C5 153 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 DCTN6O00399 190 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 SCDO00767 359 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 BCAT2O15382 392 aaPredicted RBP11.33□□□□□ -0.6
RNF4-222ENST00000541204 UTS2O95399 124 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 F13BP05160 661 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 FCER2P06734 321 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 UBL4AP11441 157 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 PRPS1P60891 318 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
RNF4-222ENST00000541204 LCN6P62502 163 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
RNF4-222ENST00000541204 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
RNF4-222ENST00000541204 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 KLHL26Q53HC5 615 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 SLC6A19Q695T7 634 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 ADAMTS18Q8TE60 1221 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 CXorf58Q96LI9 332 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 MOGAT1Q96PD6 335 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 KIF25Q9UIL4 384 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 IGHV3-20A0A0C4DH32 117 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 EFCAB7A8K855 629 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 OR2A4O95047 310 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 TACSTD2P09758 323 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 VSIG10L2P0DP72 767 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 C4BPBP20851 252 aa11.33□□□□□ -0.6
RNF4-222ENST00000541204 RAP2BP61225 183 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms