RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 J3KTA2 159 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 PRSS23O95084 383 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 SEMG1P04279 462 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 HIST1H2ABP04908 130 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 LYNX1P0DP58 116 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 UMPSP11172 480 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 RHCEP18577 417 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 ATP6V1B2P21281 511 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.33
USB1-203ENST00000539737 CHRNB3Q05901 458 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.33
USB1-203ENST00000539737 TRIP10Q15642 601 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 LCN8Q6JVE9 175 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 HIST3H2AQ7L7L0 130 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 DHFR2Q86XF0 187 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 EPHX4Q8IUS5 362 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 ZIC4Q8N9L1 334 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 PFN4Q8NHR9 129 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 HIST1H2ACQ93077 130 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.33
USB1-203ENST00000539737 ASB9Q96DX5 294 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 SGTBQ96EQ0 304 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 TRIM15Q9C019 465 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
USB1-203ENST00000539737 OBP2BQ9NPH6 170 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 MEPEQ9NQ76 525 aaPredicted RBP12.96□□□□□ -0.33
USB1-203ENST00000539737 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 MAN2C1Q9NTJ4 1040 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 RHCGQ9UBD6 479 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 NOX1Q9Y5S8 564 aa12.96□□□□□ -0.33
USB1-203ENST00000539737 IGHV1-18A0A0C4DH31 117 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 hCG_2039718K7EN88 272 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 PLPP3O14495 311 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 FFAR1O14842 300 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
USB1-203ENST00000539737 ATP5HO75947 161 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 OR7A10O76100 309 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 VENTXO95231 258 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 FABP3P05413 133 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 CFPP27918 469 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 APOBEC3AP31941 199 aaPredicted RBP12.95□□□□□ -0.34
USB1-203ENST00000539737 RASSF2P50749 326 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
USB1-203ENST00000539737 BNIP1Q12981 228 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 CCNIQ14094 377 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 NIPAL3Q6P499 406 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 CYP2R1Q6VVX0 501 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 SLC46A3Q7Z3Q1 461 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 PXKQ7Z7A4 578 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 MYPOPQ86VE0 399 aaPredicted RBP12.95□□□□□ -0.34
USB1-203ENST00000539737 PIK3C3Q8NEB9 887 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 ANKK1Q8NFD2 765 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 ACOT11Q8WXI4 607 aaPredicted RBP12.95□□□□□ -0.34
USB1-203ENST00000539737 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 LRGUKQ96M69 825 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 BTBD10Q9BSF8 475 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 THTPAQ9BU02 230 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
USB1-203ENST00000539737 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 MS4A18H0YCH9 400 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 SLC43A1O75387 559 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 H1F0P07305 194 aaKnown RBP12.94□□□□□ -0.34
USB1-203ENST00000539737 AHCYP23526 432 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 CLDN17P56750 224 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 SMIM11AP58511 58 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 DGCR6Q14129 220 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 MS4A18Q3C1V0 323 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 ZNF730Q6ZMV8 503 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 RNF113BQ8IZP6 322 aaKnown RBP12.94□□□□□ -0.34
USB1-203ENST00000539737 KDM8Q8N371 416 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 NMNAT1Q9HAN9 279 aaPredicted RBP12.94□□□□□ -0.34
USB1-203ENST00000539737 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
USB1-203ENST00000539737 C20orf141Q9NUB4 165 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 TMEM5Q9Y2B1 443 aa12.94□□□□□ -0.34
USB1-203ENST00000539737 RNF13O43567 381 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 PIP5K1CO60331 668 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 DNAJC8O75937 253 aaPredicted RBP12.93□□□□□ -0.34
USB1-203ENST00000539737 ZNF432O94892 652 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 HPRP00739 348 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 CELA3BP08861 270 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 CSF3P09919 207 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 IFI30P13284 250 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 ZNF23P17027 643 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 FUT1P19526 365 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 CALCRP30988 508 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 THBS2P35442 1172 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 SELENOPP49908 381 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 SH3BGRP55822 239 aaPredicted RBP12.93□□□□□ -0.34
USB1-203ENST00000539737 ZP4Q12836 540 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 TRAP1Q12931 704 aaKnown RBP12.93□□□□□ -0.34
USB1-203ENST00000539737 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 MBOAT2Q6ZWT7 520 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms